Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MIR15A-201ENST00000607334 83 ntBASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 AC025574.2-201ENST00000615621 514 ntBASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.11□□□□□ -1.59
CNTNAP3Q9BZ76 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 AC007685.1-201ENST00000329806 452 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 Y_RNA.542-201ENST00000384641 111 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 PPP1R11P2-201ENST00000423543 382 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 HIGD1AP2-201ENST00000446367 280 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 IGHV5-78-201ENST00000450948 295 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 AC097484.1-201ENST00000471148 389 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 RPL23AP40-201ENST00000487630 390 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 TRBV5-2-201ENST00000489095 273 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 RNU6-589P-201ENST00000516485 107 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 AC055872.1-201ENST00000570978 278 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 MIR4444-1-201ENST00000581696 74 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 MIR4444-2-201ENST00000584390 74 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 AC009314.1-201ENST00000603871 304 ntBASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CNTNAP3Q9BZ76 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 AL031595.2-201ENST00000624215 19071 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 RN7SKP224-201ENST00000364140 325 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 U3.10-201ENST00000364459 214 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 Y_RNA.369-201ENST00000365568 117 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 RNU6-1144P-201ENST00000384247 104 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 RNU6-21P-201ENST00000384710 107 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 BX276092.6-201ENST00000430476 250 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 AC112498.1-201ENST00000444401 332 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 EEF1B2P7-201ENST00000451177 676 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 BX276092.8-201ENST00000455722 250 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 ACA64.4-201ENST00000459070 127 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 U8.21-201ENST00000459536 136 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 RPS27AP13-201ENST00000498403 237 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 HMGN1P11-201ENST00000508668 303 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 SNORA31.3-201ENST00000516029 96 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 RNU6-612P-201ENST00000516909 102 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 AC008749.1-201ENST00000597650 306 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 AC011944.2-201ENST00000624440 683 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 AC004076.2-201ENST00000620532 3323 ntBASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.59
CNTNAP3Q9BZ76 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CNTNAP3Q9BZ76 AC139769.1-204ENST00000472297 1931 ntBASIC5.09□□□□□ -1.6
CNTNAP3Q9BZ76 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CNTNAP3Q9BZ76 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CNTNAP3Q9BZ76 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
CNTNAP3Q9BZ76 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP3Q9BZ76 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.08□□□□□ -1.6
CNTNAP3Q9BZ76 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.08□□□□□ -1.6
CNTNAP3Q9BZ76 GVINP1-202ENST00000531871 7271 ntBASIC5.08□□□□□ -1.6
CNTNAP3Q9BZ76 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.08□□□□□ -1.6
CNTNAP3Q9BZ76 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTNAP3Q9BZ76 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTNAP3Q9BZ76 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.08□□□□□ -1.6
CNTNAP3Q9BZ76 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP3Q9BZ76 SNORA73.1-201ENST00000363107 205 ntBASIC5.08□□□□□ -1.6
CNTNAP3Q9BZ76 RNU6-288P-201ENST00000363690 104 ntBASIC5.08□□□□□ -1.6
CNTNAP3Q9BZ76 RNA5SP28-201ENST00000363841 119 ntBASIC5.08□□□□□ -1.6
CNTNAP3Q9BZ76 RPL21P67-201ENST00000402896 478 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms