Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 RNA5SP57-201ENST00000459463 123 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AC126389.1-201ENST00000477436 290 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 CAB39P1-201ENST00000502277 460 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AC008549.1-201ENST00000512900 643 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 IGJP1-201ENST00000522682 475 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AP003497.1-201ENST00000528472 562 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AC136601.2-201ENST00000604356 474 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 DUXAP10-204ENST00000612052 616 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 MTCO1P23-201ENST00000415223 1526 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 SNORA71.3-201ENST00000362582 128 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 MIR618-201ENST00000385287 98 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 RNA5SP465-201ENST00000391195 109 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 RNU1-78P-201ENST00000391248 165 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 AL023284.1-201ENST00000403956 276 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 PSMA6P3-201ENST00000428242 164 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 AC015922.2-201ENST00000435593 184 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 AL590365.1-201ENST00000450788 243 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 RNA5SP291-201ENST00000517222 105 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 NDUFA5P6-201ENST00000542110 379 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 RRN3P3-201ENST00000549207 578 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 LARP7P2-201ENST00000575306 125 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 AL118508.4-201ENST00000624142 1176 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 AC006386.2-201ENST00000624491 75 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 AC012005.1-201ENST00000624575 75 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 ZNF680P1-201ENST00000436625 1469 ntBASIC1.05□□□□□ -2.24
VPS25Q9BRG1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
VPS25Q9BRG1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 MTND5P6-201ENST00000422338 1798 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 RNU6-252P-201ENST00000363232 107 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 MIR561-201ENST00000385216 97 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 RNU6-77P-201ENST00000410554 91 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 Y_RNA.625-201ENST00000411256 107 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 BTF3P8-201ENST00000414577 526 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AC009963.1-201ENST00000417265 157 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AL645568.3-201ENST00000433683 316 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AL161788.1-201ENST00000441805 169 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 MTND2P24-201ENST00000453434 806 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AC096576.1-201ENST00000489014 359 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AC018868.1-201ENST00000491307 315 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 RPS27AP10-201ENST00000496103 208 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AC109471.1-201ENST00000511631 612 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 RNU4-29P-201ENST00000515943 174 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AL132857.1-201ENST00000555180 708 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AC026464.5-201ENST00000562497 722 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AC124283.4-201ENST00000581815 456 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 MIR5195-201ENST00000583555 115 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AC116312.1-201ENST00000606841 314 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AC005539.1-201ENST00000443768 1479 ntBASIC1.04□□□□□ -2.24
VPS25Q9BRG1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS25Q9BRG1 MIR128-1-201ENST00000384921 82 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 RNU2-33P-201ENST00000410344 192 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 NDUFS5P4-201ENST00000412983 318 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 RPL23AP39-201ENST00000415533 405 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms