Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL365434.2-201ENST00000607979 234 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 AC096577.2-201ENST00000611455 153 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 AC039056.2-201ENST00000622261 511 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 AL606534.2-204ENST00000635008 178 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 AL596275.2-204ENST00000641628 552 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 AL596275.2-206ENST00000641957 626 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 AC083843.3-201ENST00000623679 2186 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 RNU6-288P-201ENST00000363690 104 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 Y_RNA.288-201ENST00000364854 92 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 Y_RNA.447-201ENST00000384184 113 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 Y_RNA.552-201ENST00000384665 112 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RNU6-55P-201ENST00000411092 107 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RNU4-61P-201ENST00000411243 107 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RPL21P91-201ENST00000429231 479 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC099799.1-201ENST00000439809 192 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RPL21P2-201ENST00000440049 481 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 GAPDHP27-201ENST00000447427 1020 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC012158.1-204ENST00000483430 465 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC108860.1-201ENST00000484521 383 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC018437.1-201ENST00000492214 406 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RPL22P13-201ENST00000493291 347 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RN7SL812P-201ENST00000493791 279 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RPS27AP13-201ENST00000498403 237 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RPL23AP94-201ENST00000512518 302 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RNU4-77P-201ENST00000516692 156 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RNU6-677P-201ENST00000516914 101 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AL512605.2-201ENST00000592972 256 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AL355812.1-201ENST00000603215 216 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC006254.3-201ENST00000603353 884 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC084757.4-201ENST00000616350 526 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 ZNF72P-201ENST00000425869 1908 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 MARK2P15-201ENST00000432204 2186 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC073346.2-201ENST00000624724 2058 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RNU6-874P-201ENST00000362390 105 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RNU6-989P-201ENST00000362756 107 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC243428.1-201ENST00000421099 264 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RPS15AP10-201ENST00000432472 382 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC133473.1-201ENST00000455173 299 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 RPL23AP65-201ENST00000475608 468 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC105758.1-201ENST00000506038 399 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC092436.3-201ENST00000511788 257 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AC012119.1-201ENST00000603184 222 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 AL355297.3-201ENST00000604082 446 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 SNORD58B-201ENST00000607313 66 ntBASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
SYNGAP1Q96PV0 HSPA8P4-201ENST00000511877 1920 ntBASIC4.96□□□□□ -1.61
SYNGAP1Q96PV0 EOGT-210ENST00000615922 1931 ntBASIC4.96□□□□□ -1.61
SYNGAP1Q96PV0 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.96□□□□□ -1.61
SYNGAP1Q96PV0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.96□□□□□ -1.61
SYNGAP1Q96PV0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC027287.1-201ENST00000553115 1453 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 RNA5SP119-201ENST00000362715 117 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 RNU1-20P-201ENST00000363314 162 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 Y_RNA.151-201ENST00000363566 112 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms