Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 RNU6-595P-201ENST00000363944 107 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 Y_RNA.562-201ENST00000384695 113 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 EIF4EP2-201ENST00000422816 654 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 RPL18P10-201ENST00000425606 538 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 AL132765.1-201ENST00000434165 553 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 HMGB3P17-201ENST00000504195 649 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 SNORA31.20-201ENST00000517111 133 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 RNU6-709P-201ENST00000517257 104 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 RN7SKP92-201ENST00000517266 244 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 AC109329.1-201ENST00000518744 317 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 MIR5701-3-201ENST00000578890 82 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 SNORA74C-1-201ENST00000580726 201 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 MIR5701-1-201ENST00000585138 82 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 MIR5701-2-201ENST00000615634 82 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 SDR42E1P4-201ENST00000620894 481 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 AL360181.4-201ENST00000621752 134 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 MAPK10-304ENST00000641341 3984 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 MAPK10-263ENST00000641052 4307 ntBASIC5.33□□□□□ -1.56
TRIM50Q86XT4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 RNU6-1093P-201ENST00000391194 107 ntBASIC5.32□□□□□ -1.56
TRIM50Q86XT4 RNU4-61P-201ENST00000411243 107 ntBASIC5.32□□□□□ -1.56
TRIM50Q86XT4 RPS12P23-201ENST00000419579 400 ntBASIC5.32□□□□□ -1.56
TRIM50Q86XT4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 RPEP3-201ENST00000425462 676 ntBASIC5.32□□□□□ -1.56
TRIM50Q86XT4 TOMM20P4-201ENST00000427861 435 ntBASIC5.32□□□□□ -1.56
TRIM50Q86XT4 AC079168.2-201ENST00000453977 416 ntBASIC5.32□□□□□ -1.56
TRIM50Q86XT4 LINC01399-202ENST00000458450 244 ntBASIC5.32□□□□□ -1.56
TRIM50Q86XT4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 TRBVB-201ENST00000477100 408 ntBASIC5.32□□□□□ -1.56
TRIM50Q86XT4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 AP004371.1-201ENST00000525240 214 ntBASIC5.32□□□□□ -1.56
TRIM50Q86XT4 AC103996.1-201ENST00000555468 102 ntBASIC5.32□□□□□ -1.56
TRIM50Q86XT4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 MIR4715-201ENST00000584117 79 ntBASIC5.32□□□□□ -1.56
TRIM50Q86XT4 AP000787.2-201ENST00000604432 568 ntBASIC5.32□□□□□ -1.56
TRIM50Q86XT4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TRIM50Q86XT4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 DEFB108F-201ENST00000344638 222 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 RN7SKP227-201ENST00000364445 330 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 RNU6-708P-201ENST00000384217 107 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 Y_RNA.592-201ENST00000410274 109 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 RPL23AP1-201ENST00000428990 471 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 RN7SL517P-201ENST00000462240 305 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 RPL23AP45-201ENST00000476406 468 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 AC034114.1-201ENST00000520293 285 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 MIR5696-201ENST00000578474 85 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 MIR4697-201ENST00000582977 78 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 MIR8076-201ENST00000611401 83 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 AC083809.1-201ENST00000615051 472 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 AL731566.2-201ENST00000618971 317 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 AP001642.1-201ENST00000624727 2117 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 NEAT1-202ENST00000501122 22743 ntBASIC5.31□□□□□ -1.56
TRIM50Q86XT4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM50Q86XT4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM50Q86XT4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM50Q86XT4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms