Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLCNKAP51800 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CLCNKAP51800 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CLCNKAP51800 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLCNKAP51800 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLCNKAP51800 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCNKAP51800 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.28□□□□□ -1.88
CLCNKAP51800 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CLCNKAP51800 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.28□□□□□ -1.88
CLCNKAP51800 RNU4-12P-201ENST00000365233 139 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 Y_RNA.381-201ENST00000365666 102 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLCNKAP51800 MIR1-2-201ENST00000384961 85 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 SNORD115-47-201ENST00000391226 86 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 AC110754.1-201ENST00000399740 601 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 AL359634.1-202ENST00000404721 284 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 AL590002.1-201ENST00000406554 418 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLCNKAP51800 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.28□□□□□ -1.88
CLCNKAP51800 RPL21P40-201ENST00000428586 483 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCNKAP51800 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCNKAP51800 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCNKAP51800 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCNKAP51800 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLCNKAP51800 AC108860.1-201ENST00000484521 383 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.28□□□□□ -1.88
CLCNKAP51800 RNU6-390P-201ENST00000516259 103 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 Y_RNA.704-201ENST00000516851 102 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCNKAP51800 AC107934.2-201ENST00000518653 310 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCNKAP51800 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCNKAP51800 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCNKAP51800 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCNKAP51800 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCNKAP51800 AC098848.2-201ENST00000588023 330 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 AC025449.1-201ENST00000603896 529 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 AC008962.1-201ENST00000605729 304 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 AL121992.2-201ENST00000606262 256 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 SNHG22-203ENST00000617833 660 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 AC139792.3-201ENST00000623525 224 ntBASIC3.28□□□□□ -1.88
CLCNKAP51800 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.28□□□□□ -1.88
CLCNKAP51800 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCNKAP51800 CUL1P1-201ENST00000509510 2425 ntBASIC3.28□□□□□ -1.89
CLCNKAP51800 PWAR6-201ENST00000552334 4618 ntBASIC3.28□□□□□ -1.89
CLCNKAP51800 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLCNKAP51800 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
CLCNKAP51800 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.27□□□□□ -1.89
CLCNKAP51800 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLCNKAP51800 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.27□□□□□ -1.89
CLCNKAP51800 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLCNKAP51800 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLCNKAP51800 HSPE1P11-201ENST00000339579 310 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 RNU6-188P-201ENST00000364207 107 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 RNU6-173P-201ENST00000364215 104 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 RNU6-108P-201ENST00000365558 107 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLCNKAP51800 SAR1AP2-201ENST00000392696 594 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 RNU2-9P-201ENST00000410194 145 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.27□□□□□ -1.89
CLCNKAP51800 MTATP6P18-201ENST00000417994 673 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.27□□□□□ -1.89
CLCNKAP51800 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.27□□□□□ -1.89
CLCNKAP51800 AC003071.1-201ENST00000451219 789 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 AC021205.2-201ENST00000480069 347 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 AC079382.1-201ENST00000493346 557 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 VN1R104P-201ENST00000505115 1009 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.27□□□□□ -1.89
CLCNKAP51800 RNU2-10P-201ENST00000516375 211 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 RNU7-51P-201ENST00000516560 62 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 RNU6-410P-201ENST00000517006 107 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 RNU6-840P-201ENST00000517275 65 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLCNKAP51800 AP003072.2-201ENST00000527756 676 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLCNKAP51800 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
CLCNKAP51800 AC005476.1-201ENST00000554427 397 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 OR4H12P-201ENST00000556269 907 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 RPL21P12-201ENST00000559810 515 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 MIR5195-201ENST00000583555 115 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 AL606834.2-201ENST00000602954 668 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 YPEL5P2-201ENST00000605553 359 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 SNORD39.4-201ENST00000620099 78 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 AC009161.2-201ENST00000624626 138 ntBASIC3.27□□□□□ -1.89
CLCNKAP51800 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLCNKAP51800 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLCNKAP51800 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLCNKAP51800 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CLCNKAP51800 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLCNKAP51800 RNU6-1090P-201ENST00000364065 94 ntBASIC3.26□□□□□ -1.89
CLCNKAP51800 RNA5SP387-201ENST00000364226 106 ntBASIC3.26□□□□□ -1.89
CLCNKAP51800 Y_RNA.367-201ENST00000365544 101 ntBASIC3.26□□□□□ -1.89
CLCNKAP51800 RNU5E-6P-201ENST00000365574 115 ntBASIC3.26□□□□□ -1.89
CLCNKAP51800 RNU6-74P-201ENST00000384235 107 ntBASIC3.26□□□□□ -1.89
CLCNKAP51800 SNORA36C-201ENST00000384289 132 ntBASIC3.26□□□□□ -1.89
CLCNKAP51800 MIR558-201ENST00000384920 94 ntBASIC3.26□□□□□ -1.89
CLCNKAP51800 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLCNKAP51800 TXNP7-201ENST00000406296 293 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms