Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AP001148.1-201ENST00000624124 2359 ntBASIC3.07□□□□□ -1.92
COL5A2P05997 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
COL5A2P05997 AC009487.4-201ENST00000624969 3585 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
COL5A2P05997 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.06□□□□□ -1.92
COL5A2P05997 MTND5P26-201ENST00000426018 1752 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 RNU6-462P-201ENST00000362659 105 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 RNU6-777P-201ENST00000364265 104 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 RNU6-1283P-201ENST00000365314 105 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL5A2P05997 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.06□□□□□ -1.92
COL5A2P05997 SNORA41-201ENST00000384675 132 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 RPS3AP36-201ENST00000398190 775 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 AL591416.1-201ENST00000404015 867 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 USP9YP13-201ENST00000417797 480 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 RPL21P32-201ENST00000419877 477 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.06□□□□□ -1.92
COL5A2P05997 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.06□□□□□ -1.92
COL5A2P05997 VN1R10P-201ENST00000447106 875 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 RPL7P52-201ENST00000449200 742 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 AC093392.2-201ENST00000450682 337 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 AL033528.1-201ENST00000453780 140 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 AC097493.1-201ENST00000463958 372 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 KLF3P2-201ENST00000465138 268 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.06□□□□□ -1.92
COL5A2P05997 AC106872.3-201ENST00000495104 446 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.06□□□□□ -1.92
COL5A2P05997 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.06□□□□□ -1.92
COL5A2P05997 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.06□□□□□ -1.92
COL5A2P05997 AC093331.1-201ENST00000521474 169 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 MTND4LP18-201ENST00000526864 291 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 DEFB108A-201ENST00000530110 222 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.06□□□□□ -1.92
COL5A2P05997 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.06□□□□□ -1.92
COL5A2P05997 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.06□□□□□ -1.92
COL5A2P05997 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.06□□□□□ -1.92
COL5A2P05997 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.06□□□□□ -1.92
COL5A2P05997 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.06□□□□□ -1.92
COL5A2P05997 AC107871.2-201ENST00000612894 502 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 AC091834.1-201ENST00000614543 472 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 AL157786.1-207ENST00000627771 695 ntBASIC3.06□□□□□ -1.92
COL5A2P05997 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.06□□□□□ -1.92
COL5A2P05997 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COL5A2P05997 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A2P05997 RN7SKP226-201ENST00000364912 300 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 PRRC2CP1-201ENST00000404428 159 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 MIR320C1-201ENST00000408566 88 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 RN7SKP32-201ENST00000410167 303 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 RNA5SP129-201ENST00000410276 118 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 RNA5SP247-201ENST00000411181 105 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 HMGN1P14-201ENST00000412459 517 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 AIMP1P1-201ENST00000418670 937 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 ATG3P1-201ENST00000419507 911 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 RPS27AP14-201ENST00000422868 454 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.05□□□□□ -1.92
COL5A2P05997 GDI2P2-201ENST00000445131 608 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 PAXBP1P1-201ENST00000449315 447 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 TRGVB-201ENST00000453257 471 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.05□□□□□ -1.92
COL5A2P05997 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.05□□□□□ -1.92
COL5A2P05997 FAM172BP-201ENST00000487497 1089 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.05□□□□□ -1.92
COL5A2P05997 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.05□□□□□ -1.92
COL5A2P05997 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.05□□□□□ -1.92
COL5A2P05997 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.05□□□□□ -1.92
COL5A2P05997 RPS3AP4-201ENST00000555161 764 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.05□□□□□ -1.92
COL5A2P05997 BNIP3P8-201ENST00000597863 560 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.05□□□□□ -1.92
COL5A2P05997 PSMA6P4-201ENST00000603247 718 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 AL357078.3-201ENST00000607528 618 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A2P05997 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A2P05997 AC138649.3-201ENST00000622154 254 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.05□□□□□ -1.92
COL5A2P05997 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
COL5A2P05997 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A2P05997 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A2P05997 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A2P05997 AC025125.1-201ENST00000624743 1922 ntBASIC3.05□□□□□ -1.92
COL5A2P05997 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A2P05997 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL5A2P05997 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL5A2P05997 Y_RNA.97-201ENST00000363094 102 ntBASIC3.04□□□□□ -1.92
COL5A2P05997 RNU5A-6P-201ENST00000384136 116 ntBASIC3.04□□□□□ -1.92
COL5A2P05997 RNU6-809P-201ENST00000384461 107 ntBASIC3.04□□□□□ -1.92
COL5A2P05997 U8.14-201ENST00000390843 143 ntBASIC3.04□□□□□ -1.92
COL5A2P05997 SNORD115-47-201ENST00000391226 86 ntBASIC3.04□□□□□ -1.92
COL5A2P05997 AL023284.1-201ENST00000403956 276 ntBASIC3.04□□□□□ -1.92
COL5A2P05997 Y_RNA.598-201ENST00000410480 95 ntBASIC3.04□□□□□ -1.92
COL5A2P05997 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.04□□□□□ -1.92
COL5A2P05997 AC007742.1-201ENST00000425789 329 ntBASIC3.04□□□□□ -1.92
COL5A2P05997 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.04□□□□□ -1.92
COL5A2P05997 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.04□□□□□ -1.92
COL5A2P05997 ELOCP26-201ENST00000436067 329 ntBASIC3.04□□□□□ -1.92
COL5A2P05997 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.04□□□□□ -1.92
COL5A2P05997 RPL39P6-201ENST00000448289 150 ntBASIC3.04□□□□□ -1.92
COL5A2P05997 USP9YP12-201ENST00000450481 570 ntBASIC3.04□□□□□ -1.92
COL5A2P05997 RNU6-1218P-201ENST00000458990 108 ntBASIC3.04□□□□□ -1.92
COL5A2P05997 SNORD42A-201ENST00000459584 64 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms