Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 API5P2-201ENST00000397055 1498 ntBASIC2.89□□□□□ -1.95
SNX3O60493 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SNX3O60493 MAPK10-322ENST00000641485 4530 ntBASIC2.89□□□□□ -1.95
SNX3O60493 UBE2L2-201ENST00000254302 429 ntBASIC2.88□□□□□ -1.95
SNX3O60493 FTLP6-201ENST00000355274 422 ntBASIC2.88□□□□□ -1.95
SNX3O60493 RNU6-960P-201ENST00000364056 120 ntBASIC2.88□□□□□ -1.95
SNX3O60493 RNY1P12-201ENST00000364251 105 ntBASIC2.88□□□□□ -1.95
SNX3O60493 RNA5SP515-201ENST00000364570 118 ntBASIC2.88□□□□□ -1.95
SNX3O60493 SNORA14A-201ENST00000364773 135 ntBASIC2.88□□□□□ -1.95
SNX3O60493 RNU6-217P-201ENST00000384164 104 ntBASIC2.88□□□□□ -1.95
SNX3O60493 RNU6-140P-201ENST00000384566 108 ntBASIC2.88□□□□□ -1.95
SNX3O60493 MIR512-1-201ENST00000384913 84 ntBASIC2.88□□□□□ -1.95
SNX3O60493 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.88□□□□□ -1.95
SNX3O60493 MTND3P17-201ENST00000416968 344 ntBASIC2.88□□□□□ -1.95
SNX3O60493 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.88□□□□□ -1.95
SNX3O60493 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.88□□□□□ -1.95
SNX3O60493 DDX3P2-201ENST00000446138 111 ntBASIC2.88□□□□□ -1.95
SNX3O60493 AL136380.1-201ENST00000447970 162 ntBASIC2.88□□□□□ -1.95
SNX3O60493 AP000705.1-201ENST00000454567 350 ntBASIC2.88□□□□□ -1.95
SNX3O60493 snoU13.28-201ENST00000459235 104 ntBASIC2.88□□□□□ -1.95
SNX3O60493 AC004924.1-201ENST00000480160 781 ntBASIC2.88□□□□□ -1.95
SNX3O60493 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SNX3O60493 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.88□□□□□ -1.95
SNX3O60493 RNU1-95P-201ENST00000516357 160 ntBASIC2.88□□□□□ -1.95
SNX3O60493 SCARNA13-201ENST00000516672 275 ntBASIC2.88□□□□□ -1.95
SNX3O60493 RNU1-128P-201ENST00000516704 160 ntBASIC2.88□□□□□ -1.95
SNX3O60493 SNORD59.2-201ENST00000516873 68 ntBASIC2.88□□□□□ -1.95
SNX3O60493 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SNX3O60493 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
SNX3O60493 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX3O60493 AC010653.1-201ENST00000571108 881 ntBASIC2.88□□□□□ -1.95
SNX3O60493 MIR3670-2-201ENST00000582974 65 ntBASIC2.88□□□□□ -1.95
SNX3O60493 MIR3670-1-201ENST00000584160 65 ntBASIC2.88□□□□□ -1.95
SNX3O60493 MIR3670-3-201ENST00000584855 65 ntBASIC2.88□□□□□ -1.95
SNX3O60493 AL161798.1-201ENST00000604630 131 ntBASIC2.88□□□□□ -1.95
SNX3O60493 AL161729.4-201ENST00000604650 476 ntBASIC2.88□□□□□ -1.95
SNX3O60493 AL161734.1-201ENST00000609720 557 ntBASIC2.88□□□□□ -1.95
SNX3O60493 MIR3670-4-201ENST00000612260 65 ntBASIC2.88□□□□□ -1.95
SNX3O60493 AC244100.1-202ENST00000621554 382 ntBASIC2.88□□□□□ -1.95
SNX3O60493 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.88□□□□□ -1.95
SNX3O60493 AC091953.5-201ENST00000622919 233 ntBASIC2.88□□□□□ -1.95
SNX3O60493 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SNX3O60493 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.88□□□□□ -1.95
SNX3O60493 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNX3O60493 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SNX3O60493 RNU6-288P-201ENST00000363690 104 ntBASIC2.87□□□□□ -1.95
SNX3O60493 SNORA25.6-201ENST00000364121 118 ntBASIC2.87□□□□□ -1.95
SNX3O60493 RNU6-512P-201ENST00000364438 103 ntBASIC2.87□□□□□ -1.95
SNX3O60493 Y_RNA.245-201ENST00000364493 95 ntBASIC2.87□□□□□ -1.95
SNX3O60493 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SNX3O60493 RNU6-946P-201ENST00000383878 107 ntBASIC2.87□□□□□ -1.95
SNX3O60493 MIR592-201ENST00000384959 97 ntBASIC2.87□□□□□ -1.95
SNX3O60493 RNU1-101P-201ENST00000391171 127 ntBASIC2.87□□□□□ -1.95
SNX3O60493 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.87□□□□□ -1.95
SNX3O60493 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.87□□□□□ -1.95
SNX3O60493 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNX3O60493 AC099548.1-201ENST00000421443 426 ntBASIC2.87□□□□□ -1.95
SNX3O60493 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX3O60493 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX3O60493 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.87□□□□□ -1.95
SNX3O60493 ZNF863P-201ENST00000426746 417 ntBASIC2.87□□□□□ -1.95
SNX3O60493 AC104651.1-201ENST00000427559 735 ntBASIC2.87□□□□□ -1.95
SNX3O60493 HMGB1P27-201ENST00000431429 603 ntBASIC2.87□□□□□ -1.95
SNX3O60493 RPS24P1-201ENST00000438550 371 ntBASIC2.87□□□□□ -1.95
SNX3O60493 MRPL50P4-201ENST00000446432 475 ntBASIC2.87□□□□□ -1.95
SNX3O60493 AL590639.1-201ENST00000456484 337 ntBASIC2.87□□□□□ -1.95
SNX3O60493 AC090525.1-201ENST00000479116 478 ntBASIC2.87□□□□□ -1.95
SNX3O60493 AC105252.1-201ENST00000503089 286 ntBASIC2.87□□□□□ -1.95
SNX3O60493 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.87□□□□□ -1.95
SNX3O60493 MTCO3P28-201ENST00000513351 515 ntBASIC2.87□□□□□ -1.95
SNX3O60493 SNORA9.3-201ENST00000516383 129 ntBASIC2.87□□□□□ -1.95
SNX3O60493 SCARNA24.1-201ENST00000516465 137 ntBASIC2.87□□□□□ -1.95
SNX3O60493 RNU6-430P-201ENST00000517078 107 ntBASIC2.87□□□□□ -1.95
SNX3O60493 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX3O60493 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX3O60493 AC087883.1-201ENST00000551882 391 ntBASIC2.87□□□□□ -1.95
SNX3O60493 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX3O60493 AC068135.2-201ENST00000569293 1028 ntBASIC2.87□□□□□ -1.95
SNX3O60493 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
SNX3O60493 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX3O60493 MIR98-201ENST00000606724 119 ntBASIC2.87□□□□□ -1.95
SNX3O60493 AC109347.2-201ENST00000610220 349 ntBASIC2.87□□□□□ -1.95
SNX3O60493 AC007998.5-201ENST00000622938 237 ntBASIC2.87□□□□□ -1.95
SNX3O60493 AC099506.2-201ENST00000623074 221 ntBASIC2.87□□□□□ -1.95
SNX3O60493 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNX3O60493 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
SNX3O60493 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNX3O60493 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.86□□□□□ -1.95
SNX3O60493 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNX3O60493 Y_RNA.22-201ENST00000362492 102 ntBASIC2.86□□□□□ -1.95
SNX3O60493 RNU6-1119P-201ENST00000384349 108 ntBASIC2.86□□□□□ -1.95
SNX3O60493 MIR558-201ENST00000384920 94 ntBASIC2.86□□□□□ -1.95
SNX3O60493 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SNX3O60493 AL354719.1-201ENST00000406535 843 ntBASIC2.86□□□□□ -1.95
SNX3O60493 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.86□□□□□ -1.95
SNX3O60493 HSPE1P1-201ENST00000421494 318 ntBASIC2.86□□□□□ -1.95
SNX3O60493 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.86□□□□□ -1.95
SNX3O60493 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.86□□□□□ -1.95
SNX3O60493 PRDX3P3-201ENST00000447765 522 ntBASIC2.86□□□□□ -1.95
SNX3O60493 AC079448.1-201ENST00000449377 373 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms