Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RPL23AP82-202ENST00000427528 469 ntBASIC3.05□□□□□ -1.92
SSX4O60224 AC010975.2-201ENST00000427781 588 ntBASIC3.05□□□□□ -1.92
SSX4O60224 HMGB1P27-201ENST00000431429 603 ntBASIC3.05□□□□□ -1.92
SSX4O60224 RPL23AP30-201ENST00000432419 501 ntBASIC3.05□□□□□ -1.92
SSX4O60224 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.05□□□□□ -1.92
SSX4O60224 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX4O60224 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX4O60224 RNU6-420P-201ENST00000458780 107 ntBASIC3.05□□□□□ -1.92
SSX4O60224 CENPBD1P1-201ENST00000464061 469 ntBASIC3.05□□□□□ -1.92
SSX4O60224 AC025518.1-201ENST00000479856 347 ntBASIC3.05□□□□□ -1.92
SSX4O60224 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.05□□□□□ -1.92
SSX4O60224 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.05□□□□□ -1.92
SSX4O60224 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX4O60224 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX4O60224 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX4O60224 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX4O60224 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX4O60224 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.05□□□□□ -1.92
SSX4O60224 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SSX4O60224 AC136475.10-201ENST00000620253 385 ntBASIC3.05□□□□□ -1.92
SSX4O60224 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX4O60224 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.05□□□□□ -1.92
SSX4O60224 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SSX4O60224 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SSX4O60224 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
SSX4O60224 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.05□□□□□ -1.92
SSX4O60224 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.05□□□□□ -1.92
SSX4O60224 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSX4O60224 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSX4O60224 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.05□□□□□ -1.92
SSX4O60224 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SSX4O60224 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSX4O60224 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSX4O60224 UBE2L2-201ENST00000254302 429 ntBASIC3.04□□□□□ -1.92
SSX4O60224 RNU6-1167P-201ENST00000363227 94 ntBASIC3.04□□□□□ -1.92
SSX4O60224 RNU6-288P-201ENST00000363690 104 ntBASIC3.04□□□□□ -1.92
SSX4O60224 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSX4O60224 RNU6-641P-201ENST00000384006 107 ntBASIC3.04□□□□□ -1.92
SSX4O60224 U3.39-201ENST00000408569 239 ntBASIC3.04□□□□□ -1.92
SSX4O60224 RNU6-1077P-201ENST00000410506 102 ntBASIC3.04□□□□□ -1.92
SSX4O60224 RNU2-39P-201ENST00000410604 198 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX4O60224 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX4O60224 AC104651.1-201ENST00000427559 735 ntBASIC3.04□□□□□ -1.92
SSX4O60224 DPPA2P1-201ENST00000428060 556 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.04□□□□□ -1.92
SSX4O60224 OR2B8P-201ENST00000432841 938 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX4O60224 GPR143P-201ENST00000434155 205 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AL357552.1-201ENST00000445254 415 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.04□□□□□ -1.92
SSX4O60224 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SSX4O60224 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX4O60224 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.04□□□□□ -1.92
SSX4O60224 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX4O60224 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX4O60224 RN7SL75P-201ENST00000461926 281 ntBASIC3.04□□□□□ -1.92
SSX4O60224 RPS3AP17-201ENST00000472594 777 ntBASIC3.04□□□□□ -1.92
SSX4O60224 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX4O60224 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SSX4O60224 MTND2P33-201ENST00000506452 1031 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX4O60224 RNU6-928P-201ENST00000516876 104 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AP003072.2-201ENST00000527756 676 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.04□□□□□ -1.92
SSX4O60224 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX4O60224 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.04□□□□□ -1.92
SSX4O60224 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX4O60224 MIR3609-201ENST00000582661 80 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AC098848.2-201ENST00000588023 330 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AC004223.2-201ENST00000590309 544 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.04□□□□□ -1.92
SSX4O60224 AC098826.3-201ENST00000603823 466 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AC104763.2-201ENST00000604179 382 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AL121992.2-201ENST00000606262 256 ntBASIC3.04□□□□□ -1.92
SSX4O60224 AL365204.3-201ENST00000612448 685 ntBASIC3.04□□□□□ -1.92
SSX4O60224 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX4O60224 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX4O60224 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.04□□□□□ -1.92
SSX4O60224 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.04□□□□□ -1.92
SSX4O60224 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.04□□□□□ -1.92
SSX4O60224 AC092447.7-201ENST00000422212 1621 ntBASIC3.04□□□□□ -1.92
SSX4O60224 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSX4O60224 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SSX4O60224 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSX4O60224 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSX4O60224 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSX4O60224 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SSX4O60224 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SSX4O60224 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.03□□□□□ -1.92
SSX4O60224 Y_RNA.517-201ENST00000384551 106 ntBASIC3.03□□□□□ -1.92
SSX4O60224 RPL21P3-201ENST00000395517 478 ntBASIC3.03□□□□□ -1.92
SSX4O60224 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.03□□□□□ -1.92
SSX4O60224 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AC114491.1-201ENST00000416095 246 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.03□□□□□ -1.92
SSX4O60224 MTCO2P11-201ENST00000431069 680 ntBASIC3.03□□□□□ -1.92
SSX4O60224 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.03□□□□□ -1.92
SSX4O60224 CYCSP32-201ENST00000440548 321 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms