Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 Z99755.1-201ENST00000414048 380 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AL035423.1-201ENST00000420331 213 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AL109913.1-201ENST00000421173 514 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 DPPA2P1-201ENST00000428060 556 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 PSPHP1-201ENST00000450062 261 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 MRPS17P3-201ENST00000465453 385 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 RN7SL442P-201ENST00000473804 320 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AC012181.1-201ENST00000479895 423 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 RPS3AP14-201ENST00000483907 780 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 RPL9P33-201ENST00000484311 566 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 APOOP4-201ENST00000513530 597 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-506P-201ENST00000516553 94 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AP003034.1-201ENST00000534621 422 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AC016957.1-201ENST00000534895 309 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AMZ2P1-203ENST00000565833 850 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 HMGB1P6-201ENST00000569046 646 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 MIR4474-201ENST00000579189 78 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AC080078.2-201ENST00000603766 501 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AC025449.1-201ENST00000603896 529 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AL359880.1-201ENST00000621879 266 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 CR392039.5-201ENST00000623201 510 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 AC005609.4-201ENST00000625071 447 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 RNU1-75P-201ENST00000347264 129 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-288P-201ENST00000363690 104 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-61P-201ENST00000365528 109 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 Y_RNA.516-201ENST00000384541 124 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 RPS4XP8-201ENST00000402039 771 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-387P-201ENST00000411331 105 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AL356968.1-201ENST00000416622 474 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 MTCO1P21-201ENST00000416634 589 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 RPL31P12-201ENST00000422587 358 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AC012498.1-201ENST00000424037 437 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AC018644.1-201ENST00000429934 551 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AL591212.2-201ENST00000433923 257 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 GOT2P5-201ENST00000433995 546 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 HMGN2P20-201ENST00000437531 273 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 MTND4P25-201ENST00000441039 533 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AC093899.1-201ENST00000457984 376 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 RPL39P36-201ENST00000490784 156 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 MTND4LP22-201ENST00000508209 276 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AC010265.1-201ENST00000513509 211 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AP001893.2-201ENST00000526949 202 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 OR5BN1P-201ENST00000532955 829 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 MIR4444-1-201ENST00000581696 74 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 MIR3609-201ENST00000582661 80 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 MIR4444-2-201ENST00000584390 74 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AC136601.2-201ENST00000604356 474 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 HSPE1P7-201ENST00000604681 321 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AC017083.3-201ENST00000609955 700 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AC039056.2-201ENST00000622261 511 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AC025034.2-201ENST00000623264 286 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 AC004972.1-201ENST00000623934 2209 ntBASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
SLC6A13Q9NSD5 MFSD8-233ENST00000641482 4860 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 RNU4-48P-201ENST00000365559 182 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-217P-201ENST00000384164 104 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-606P-201ENST00000384721 111 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 MTCO3P40-201ENST00000392516 676 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 RNU2-9P-201ENST00000410194 145 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 RNA5SP38-201ENST00000410750 119 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 RPS12P24-201ENST00000412619 387 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC092809.3-201ENST00000415453 231 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC069157.1-201ENST00000421749 137 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 ISCA1P1-201ENST00000426679 387 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 ZNF863P-201ENST00000426746 417 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 ELOCP14-201ENST00000428070 331 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 TIMM9P3-201ENST00000428659 274 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 HSPD1P21-201ENST00000436541 245 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 ELOCP7-201ENST00000439968 331 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 RPS24P13-201ENST00000442520 397 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 NOTCH2P1-201ENST00000443481 624 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 DDX3P2-201ENST00000446138 111 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms