Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 ELOCP20-201ENST00000422460 345 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AL645608.4-201ENST00000423619 154 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AL590762.4-201ENST00000425885 253 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AL078601.1-201ENST00000444542 271 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 RN7SL558P-201ENST00000497468 299 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 RNU6-1143P-201ENST00000516125 104 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 RNU6-911P-201ENST00000516523 104 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 OR5D17P-201ENST00000531492 978 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AC005868.1-201ENST00000536421 331 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AMZ2P1-203ENST00000565833 850 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AC234771.5-201ENST00000600161 514 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AL121932.1-201ENST00000605542 214 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AC007390.2-201ENST00000606229 3803 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AL022401.1-201ENST00000619498 108 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AL159153.1-201ENST00000619688 317 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 AC233263.6-201ENST00000631132 1963 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VRTNQ9H8Y1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
VRTNQ9H8Y1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VRTNQ9H8Y1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VRTNQ9H8Y1 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VRTNQ9H8Y1 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 OR56A5-201ENST00000340110 738 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 Y_RNA.447-201ENST00000384184 113 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 RNU6-472P-201ENST00000384299 107 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 RNA5SP113-201ENST00000410486 84 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 MTND3P9-201ENST00000429526 346 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 AC013470.1-201ENST00000453438 462 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 SNORA40.15-201ENST00000516884 107 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 SNORA74C-1-201ENST00000580726 201 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 RAC1P9-201ENST00000604990 392 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 AL391358.1-201ENST00000605342 190 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 AL049539.1-201ENST00000611964 459 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 AC064801.1-201ENST00000612025 407 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 AC099506.2-201ENST00000623074 221 ntBASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VRTNQ9H8Y1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 RNU6-428P-201ENST00000362942 107 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 RNU6-770P-201ENST00000363929 105 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 MIR493-201ENST00000385254 89 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 U3.30-201ENST00000391308 210 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 RN7SKP100-201ENST00000411258 284 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 HIGD1AP2-201ENST00000446367 280 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 RPS5P7-201ENST00000456664 608 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 AC092324.1-201ENST00000468671 324 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 SCARNA22-201ENST00000503991 125 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 AC008958.1-201ENST00000511047 682 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 AC005476.1-201ENST00000554427 397 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 HSPE1P5-201ENST00000561489 272 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 MIR3934-201ENST00000579806 107 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 MIR4436B2-201ENST00000581415 91 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 MIR4436B1-201ENST00000583272 91 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 AL390123.1-201ENST00000603216 237 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 AC136601.2-201ENST00000604356 474 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 AC103858.2-201ENST00000621471 543 ntBASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.2□□□□□ -1.58
VRTNQ9H8Y1 U6.104-201ENST00000637979 90 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms