Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF39Q9H2S5 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RNF39Q9H2S5 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
RNF39Q9H2S5 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF39Q9H2S5 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF39Q9H2S5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RNF39Q9H2S5 DEFB108F-201ENST00000344638 222 ntBASIC6.96□□□□□ -1.3
RNF39Q9H2S5 EIF4A1P12-201ENST00000551910 141 ntBASIC6.96□□□□□ -1.3
RNF39Q9H2S5 MIR6811-201ENST00000620409 58 ntBASIC6.96□□□□□ -1.3
RNF39Q9H2S5 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
RNF39Q9H2S5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
RNF39Q9H2S5 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF39Q9H2S5 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RNF39Q9H2S5 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF39Q9H2S5 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
RNF39Q9H2S5 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
RNF39Q9H2S5 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 LDHAL6CP-202ENST00000550738 3224 ntBASIC6.95□□□□□ -1.3
RNF39Q9H2S5 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 RN7SKP229-201ENST00000410465 302 ntBASIC6.95□□□□□ -1.3
RNF39Q9H2S5 RPL12P11-201ENST00000439970 501 ntBASIC6.95□□□□□ -1.3
RNF39Q9H2S5 RN7SL705P-201ENST00000481678 294 ntBASIC6.95□□□□□ -1.3
RNF39Q9H2S5 RNU6-687P-201ENST00000516443 89 ntBASIC6.95□□□□□ -1.3
RNF39Q9H2S5 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 AC074141.1-201ENST00000588129 2995 ntBASIC6.95□□□□□ -1.3
RNF39Q9H2S5 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF39Q9H2S5 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 MIR1282-201ENST00000408865 101 ntBASIC6.94□□□□□ -1.3
RNF39Q9H2S5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 SNRPGP13-201ENST00000442212 177 ntBASIC6.94□□□□□ -1.3
RNF39Q9H2S5 AL450471.1-201ENST00000447509 127 ntBASIC6.94□□□□□ -1.3
RNF39Q9H2S5 RPS23P4-201ENST00000487908 423 ntBASIC6.94□□□□□ -1.3
RNF39Q9H2S5 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 RN7SL366P-201ENST00000577957 292 ntBASIC6.94□□□□□ -1.3
RNF39Q9H2S5 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF39Q9H2S5 AC010624.4-201ENST00000597606 1351 ntBASIC6.94□□□□□ -1.3
RNF39Q9H2S5 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 LINC02035-201ENST00000610128 5476 ntBASIC6.93□□□□□ -1.3
RNF39Q9H2S5 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 SNORA77.2-201ENST00000408571 112 ntBASIC6.93□□□□□ -1.3
RNF39Q9H2S5 RN7SL254P-201ENST00000460609 284 ntBASIC6.93□□□□□ -1.3
RNF39Q9H2S5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 AC090897.2-201ENST00000581715 130 ntBASIC6.93□□□□□ -1.3
RNF39Q9H2S5 SNORD84-203ENST00000584275 78 ntBASIC6.93□□□□□ -1.3
RNF39Q9H2S5 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 MIR6778-201ENST00000617912 73 ntBASIC6.93□□□□□ -1.3
RNF39Q9H2S5 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF39Q9H2S5 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms