Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.89□□□□□ -1.79
SMOQ99835 DPPA3P3-201ENST00000603842 430 ntBASIC3.89□□□□□ -1.79
SMOQ99835 AC012409.4-201ENST00000612923 249 ntBASIC3.89□□□□□ -1.79
SMOQ99835 SDR42E1P2-201ENST00000614861 481 ntBASIC3.89□□□□□ -1.79
SMOQ99835 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.89□□□□□ -1.79
SMOQ99835 AL357559.1-201ENST00000622228 274 ntBASIC3.89□□□□□ -1.79
SMOQ99835 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMOQ99835 AC090337.1-201ENST00000579651 2074 ntBASIC3.89□□□□□ -1.79
SMOQ99835 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMOQ99835 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SMOQ99835 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.89□□□□□ -1.79
SMOQ99835 MTND4P14-201ENST00000435799 1354 ntBASIC3.89□□□□□ -1.79
SMOQ99835 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMOQ99835 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMOQ99835 TPTE2P4-201ENST00000258589 1605 ntBASIC3.88□□□□□ -1.79
SMOQ99835 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMOQ99835 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
SMOQ99835 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.88□□□□□ -1.79
SMOQ99835 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMOQ99835 U3.12-201ENST00000364498 214 ntBASIC3.88□□□□□ -1.79
SMOQ99835 U3.15-201ENST00000365398 212 ntBASIC3.88□□□□□ -1.79
SMOQ99835 RNU6-387P-201ENST00000411331 105 ntBASIC3.88□□□□□ -1.79
SMOQ99835 RAC1P3-201ENST00000416129 580 ntBASIC3.88□□□□□ -1.79
SMOQ99835 RPL21P112-201ENST00000434403 463 ntBASIC3.88□□□□□ -1.79
SMOQ99835 NDUFB1P1-201ENST00000435191 180 ntBASIC3.88□□□□□ -1.79
SMOQ99835 NEFMP1-201ENST00000443423 1006 ntBASIC3.88□□□□□ -1.79
SMOQ99835 PRPS1P1-201ENST00000445305 876 ntBASIC3.88□□□□□ -1.79
SMOQ99835 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.88□□□□□ -1.79
SMOQ99835 FABP5P13-201ENST00000452144 328 ntBASIC3.88□□□□□ -1.79
SMOQ99835 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.88□□□□□ -1.79
SMOQ99835 HMGN1P11-201ENST00000508668 303 ntBASIC3.88□□□□□ -1.79
SMOQ99835 FAM206BP-201ENST00000510179 541 ntBASIC3.88□□□□□ -1.79
SMOQ99835 AC104619.4-201ENST00000510773 249 ntBASIC3.88□□□□□ -1.79
SMOQ99835 RNU6-123P-201ENST00000516163 102 ntBASIC3.88□□□□□ -1.79
SMOQ99835 RNU6-685P-201ENST00000517088 95 ntBASIC3.88□□□□□ -1.79
SMOQ99835 RNU6-840P-201ENST00000517275 65 ntBASIC3.88□□□□□ -1.79
SMOQ99835 AC026403.1-201ENST00000518938 295 ntBASIC3.88□□□□□ -1.79
SMOQ99835 ERHP1-201ENST00000523006 310 ntBASIC3.88□□□□□ -1.79
SMOQ99835 MTND4P7-201ENST00000523876 130 ntBASIC3.88□□□□□ -1.79
SMOQ99835 CBX3P7-201ENST00000532876 502 ntBASIC3.88□□□□□ -1.79
SMOQ99835 HPRT1P3-201ENST00000539521 576 ntBASIC3.88□□□□□ -1.79
SMOQ99835 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.88□□□□□ -1.79
SMOQ99835 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.88□□□□□ -1.79
SMOQ99835 MIR4444-1-201ENST00000581696 74 ntBASIC3.88□□□□□ -1.79
SMOQ99835 MIR4444-2-201ENST00000584390 74 ntBASIC3.88□□□□□ -1.79
SMOQ99835 SNRPGP15-201ENST00000600149 222 ntBASIC3.88□□□□□ -1.79
SMOQ99835 AC025946.2-201ENST00000603398 234 ntBASIC3.88□□□□□ -1.79
SMOQ99835 CTHRC1P1-201ENST00000605383 469 ntBASIC3.88□□□□□ -1.79
SMOQ99835 AC092807.2-201ENST00000609367 243 ntBASIC3.88□□□□□ -1.79
SMOQ99835 uc_338.5-201ENST00000611839 155 ntBASIC3.88□□□□□ -1.79
SMOQ99835 RMST_7.1-201ENST00000621935 268 ntBASIC3.88□□□□□ -1.79
SMOQ99835 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.88□□□□□ -1.79
SMOQ99835 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.88□□□□□ -1.79
SMOQ99835 AL034408.1-202ENST00000636088 415 ntBASIC3.88□□□□□ -1.79
SMOQ99835 MIR4275-201ENST00000636486 87 ntBASIC3.88□□□□□ -1.79
SMOQ99835 AP000553.6-201ENST00000641242 118 ntBASIC3.88□□□□□ -1.79
SMOQ99835 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SMOQ99835 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMOQ99835 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SMOQ99835 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
SMOQ99835 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMOQ99835 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.88□□□□□ -1.79
SMOQ99835 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SMOQ99835 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SMOQ99835 AL137003.2-201ENST00000606924 2538 ntBASIC3.87□□□□□ -1.79
SMOQ99835 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMOQ99835 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMOQ99835 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMOQ99835 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SMOQ99835 AC007685.1-201ENST00000329806 452 ntBASIC3.87□□□□□ -1.79
SMOQ99835 RNU6-335P-201ENST00000364563 113 ntBASIC3.87□□□□□ -1.79
SMOQ99835 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SMOQ99835 RNU6-116P-201ENST00000384042 109 ntBASIC3.87□□□□□ -1.79
SMOQ99835 SNORA36C-201ENST00000384289 132 ntBASIC3.87□□□□□ -1.79
SMOQ99835 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SMOQ99835 RNU4-46P-201ENST00000410818 138 ntBASIC3.87□□□□□ -1.79
SMOQ99835 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.87□□□□□ -1.79
SMOQ99835 ATP5A1P2-201ENST00000412323 255 ntBASIC3.87□□□□□ -1.79
SMOQ99835 AC092809.3-201ENST00000415453 231 ntBASIC3.87□□□□□ -1.79
SMOQ99835 AC091286.1-201ENST00000431233 461 ntBASIC3.87□□□□□ -1.79
SMOQ99835 HMGB3P11-201ENST00000440127 604 ntBASIC3.87□□□□□ -1.79
SMOQ99835 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.87□□□□□ -1.79
SMOQ99835 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.87□□□□□ -1.79
SMOQ99835 RNU6-1208P-201ENST00000459588 107 ntBASIC3.87□□□□□ -1.79
SMOQ99835 RPL21P8-201ENST00000465083 535 ntBASIC3.87□□□□□ -1.79
SMOQ99835 AP000926.1-201ENST00000479573 241 ntBASIC3.87□□□□□ -1.79
SMOQ99835 AC083904.1-201ENST00000487828 231 ntBASIC3.87□□□□□ -1.79
SMOQ99835 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.87□□□□□ -1.79
SMOQ99835 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.87□□□□□ -1.79
SMOQ99835 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.87□□□□□ -1.79
SMOQ99835 RNU6-277P-201ENST00000516272 106 ntBASIC3.87□□□□□ -1.79
SMOQ99835 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.87□□□□□ -1.79
SMOQ99835 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.87□□□□□ -1.79
SMOQ99835 AC011611.1-201ENST00000552179 197 ntBASIC3.87□□□□□ -1.79
SMOQ99835 AC026464.5-201ENST00000562497 722 ntBASIC3.87□□□□□ -1.79
SMOQ99835 uc_338.32-201ENST00000615087 172 ntBASIC3.87□□□□□ -1.79
SMOQ99835 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.87□□□□□ -1.79
SMOQ99835 AC007998.5-201ENST00000622938 237 ntBASIC3.87□□□□□ -1.79
SMOQ99835 AL133216.2-202ENST00000634512 349 ntBASIC3.87□□□□□ -1.79
SMOQ99835 AL365440.1-201ENST00000436135 2167 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms