Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC010653.1-201ENST00000571108 881 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AL713922.2-201ENST00000619384 716 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AL354798.1-201ENST00000622505 329 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 AL139811.1-201ENST00000424779 2299 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 RNU6-490P-201ENST00000362985 107 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 RNU6-214P-201ENST00000384130 107 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 SNORD66.1-201ENST00000391230 76 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 Y_RNA.618-201ENST00000410949 107 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 HSPE1P12-201ENST00000412576 301 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 RPL21P109-201ENST00000422213 475 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 AL691449.1-201ENST00000426570 421 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 AL359672.1-201ENST00000442302 409 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 RPL21P103-201ENST00000479921 488 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 AC012158.1-204ENST00000483430 465 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 AC104164.2-201ENST00000496953 495 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 TBCAP3-201ENST00000512475 312 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 RNU6-307P-201ENST00000516743 106 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 RN7SKP258-201ENST00000517151 304 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 RNU6-323P-201ENST00000521915 107 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 COX6CP5-201ENST00000527162 228 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 IGHV3-29-201ENST00000604817 344 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 AC004696.1-201ENST00000614345 607 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 MTND5P30-201ENST00000452896 1731 ntBASIC5.26□□□□□ -1.57
USPL1Q5W0Q7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 PNPT1P2-201ENST00000456768 2050 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 Y_RNA.364-201ENST00000365532 101 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 Y_RNA.480-201ENST00000384364 102 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 MT-TG-201ENST00000387429 68 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 TBCAP1-201ENST00000436520 327 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 NOTCH2P1-201ENST00000443481 624 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 RNU6-1332P-201ENST00000516666 104 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 AC026371.1-201ENST00000551867 419 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 VN1R107P-201ENST00000601784 209 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 AC124312.5-201ENST00000604451 268 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 SNORA51-201ENST00000606420 132 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 AC009229.3-201ENST00000608056 282 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 SDR42E1P2-201ENST00000614861 481 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 Z69720.2-201ENST00000624755 279 ntBASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
USPL1Q5W0Q7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 SNORD62.1-201ENST00000362541 86 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 RNU6-1249P-201ENST00000363237 111 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 RNU6-263P-201ENST00000363811 107 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 RNU6-213P-201ENST00000384051 104 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 RNU6-574P-201ENST00000384265 107 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 MIR568-201ENST00000385036 95 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 RNU6-712P-201ENST00000410558 100 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 PRSS3P4-201ENST00000453323 162 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 SNORD5.1-201ENST00000458800 75 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 AC117503.1-201ENST00000472241 394 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 AC096745.1-201ENST00000509945 370 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 SNORA31.3-201ENST00000516029 96 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms