Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.15□□□□□ -1.91
CLDN20P56880 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN20P56880 HMGB1P6-201ENST00000569046 646 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN20P56880 AC107294.3-201ENST00000609211 526 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 AC019176.2-201ENST00000611579 315 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 U6atac.1-201ENST00000616025 117 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 AC012314.7-201ENST00000619693 93 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 AL589994.2-201ENST00000621124 579 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN20P56880 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN20P56880 U6.98-201ENST00000637157 84 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 U6.105-201ENST00000637379 88 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN20P56880 AC068647.1-201ENST00000489539 2265 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN20P56880 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN20P56880 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN20P56880 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CLDN20P56880 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN20P56880 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CLDN20P56880 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN20P56880 AC004972.1-201ENST00000623934 2209 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN20P56880 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN20P56880 RNU6-1085P-201ENST00000363576 107 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 PTMAP5-201ENST00000393073 333 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CLDN20P56880 AC007390.1-201ENST00000415722 356 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 YPEL5P1-201ENST00000419731 367 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN20P56880 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN20P56880 AL590383.1-201ENST00000428602 75 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.14□□□□□ -1.91
CLDN20P56880 MTATP6P16-201ENST00000434543 526 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN20P56880 RPS15AP9-201ENST00000439856 381 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 NEFMP1-201ENST00000443423 1006 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 PRDX3P3-201ENST00000447765 522 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 CYCSP35-201ENST00000451978 304 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 HMGN1P18-201ENST00000457642 277 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN20P56880 AC013267.1-201ENST00000458227 267 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 RN7SL594P-201ENST00000470590 287 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN20P56880 AC116562.3-201ENST00000506136 177 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 ARL4AP2-201ENST00000507378 601 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 SNORA31.3-201ENST00000516029 96 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 RNU2-27P-201ENST00000516185 142 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 RNU6-927P-201ENST00000516199 100 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 RNU6-1256P-201ENST00000516539 103 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 SNORA64.4-201ENST00000516632 81 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 MIR2276-201ENST00000516886 89 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.14□□□□□ -1.91
CLDN20P56880 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN20P56880 AC104027.1-201ENST00000521887 300 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AP001646.1-201ENST00000527936 915 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AC068587.5-201ENST00000528506 175 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN20P56880 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN20P56880 HMGB1P33-201ENST00000563485 527 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AC067852.3-201ENST00000589177 561 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AP001330.5-201ENST00000607176 411 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AC069200.1-201ENST00000609511 323 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AL110115.1-201ENST00000614396 364 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AC090132.2-201ENST00000615881 347 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AC007998.5-201ENST00000622938 237 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AC139792.3-201ENST00000623525 224 ntBASIC3.14□□□□□ -1.91
CLDN20P56880 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CLDN20P56880 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN20P56880 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CLDN20P56880 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN20P56880 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN20P56880 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN20P56880 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN20P56880 MTND5P17-201ENST00000418405 1603 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 MIR148B-201ENST00000362252 99 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 RNA5SP50-201ENST00000363731 107 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CLDN20P56880 RNU6-946P-201ENST00000383878 107 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 Y_RNA.409-201ENST00000383990 98 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 Y_RNA.481-201ENST00000384373 102 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 Y_RNA.554-201ENST00000384672 102 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 RNU6-606P-201ENST00000384721 111 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 SNORD17-201ENST00000390930 237 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 MIR548F1-201ENST00000408667 84 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 RNU2-9P-201ENST00000410194 145 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.13□□□□□ -1.91
CLDN20P56880 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN20P56880 SDCBPP3-201ENST00000419629 891 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN20P56880 AL353193.1-201ENST00000421444 268 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN20P56880 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN20P56880 AC093106.2-201ENST00000428212 385 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 AL159987.2-201ENST00000432754 307 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 MTATP6P13-201ENST00000438531 667 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 DDX3P2-201ENST00000446138 111 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms