Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.95□□□□□ -1.78
PER3P56645 Y_RNA.682-201ENST00000516457 100 ntBASIC3.95□□□□□ -1.78
PER3P56645 RNA5SP143-201ENST00000516936 115 ntBASIC3.95□□□□□ -1.78
PER3P56645 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.95□□□□□ -1.78
PER3P56645 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.95□□□□□ -1.78
PER3P56645 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.95□□□□□ -1.78
PER3P56645 AC024220.1-201ENST00000603675 484 ntBASIC3.95□□□□□ -1.78
PER3P56645 AP001330.4-201ENST00000604350 154 ntBASIC3.95□□□□□ -1.78
PER3P56645 ATP1B3P1-201ENST00000605365 821 ntBASIC3.95□□□□□ -1.78
PER3P56645 HMGB1P50-201ENST00000605814 607 ntBASIC3.95□□□□□ -1.78
PER3P56645 MTND1P37-201ENST00000636562 264 ntBASIC3.95□□□□□ -1.78
PER3P56645 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PER3P56645 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PER3P56645 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.95□□□□□ -1.78
PER3P56645 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PER3P56645 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
PER3P56645 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PER3P56645 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PER3P56645 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PER3P56645 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.95□□□□□ -1.78
PER3P56645 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PER3P56645 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PER3P56645 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PER3P56645 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PER3P56645 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PER3P56645 NOL8P1-201ENST00000508336 3529 ntBASIC3.94□□□□□ -1.78
PER3P56645 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PER3P56645 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PER3P56645 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PER3P56645 RNA5SP283-201ENST00000365604 119 ntBASIC3.94□□□□□ -1.78
PER3P56645 AL590704.1-201ENST00000402856 794 ntBASIC3.94□□□□□ -1.78
PER3P56645 HSPE1P8-201ENST00000406997 288 ntBASIC3.94□□□□□ -1.78
PER3P56645 CYCSP19-201ENST00000411715 316 ntBASIC3.94□□□□□ -1.78
PER3P56645 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.94□□□□□ -1.78
PER3P56645 BX842559.1-201ENST00000419615 532 ntBASIC3.94□□□□□ -1.78
PER3P56645 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.94□□□□□ -1.78
PER3P56645 AL117339.2-201ENST00000430475 180 ntBASIC3.94□□□□□ -1.78
PER3P56645 RPS3AP52-201ENST00000435639 297 ntBASIC3.94□□□□□ -1.78
PER3P56645 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.94□□□□□ -1.78
PER3P56645 AL162151.2-201ENST00000448875 158 ntBASIC3.94□□□□□ -1.78
PER3P56645 RPL23AP31-201ENST00000456160 467 ntBASIC3.94□□□□□ -1.78
PER3P56645 HMGB3P30-201ENST00000457863 606 ntBASIC3.94□□□□□ -1.78
PER3P56645 RNU7-167P-201ENST00000459160 62 ntBASIC3.94□□□□□ -1.78
PER3P56645 AP000873.1-201ENST00000463987 400 ntBASIC3.94□□□□□ -1.78
PER3P56645 HIGD1AP13-201ENST00000509878 289 ntBASIC3.94□□□□□ -1.78
PER3P56645 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PER3P56645 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.94□□□□□ -1.78
PER3P56645 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.94□□□□□ -1.78
PER3P56645 RNU6-914P-201ENST00000516749 109 ntBASIC3.94□□□□□ -1.78
PER3P56645 RNU6-273P-201ENST00000516937 96 ntBASIC3.94□□□□□ -1.78
PER3P56645 RNA5SP471-201ENST00000516971 106 ntBASIC3.94□□□□□ -1.78
PER3P56645 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.94□□□□□ -1.78
PER3P56645 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.94□□□□□ -1.78
PER3P56645 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.94□□□□□ -1.78
PER3P56645 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.94□□□□□ -1.78
PER3P56645 AL360157.1-201ENST00000565962 87 ntBASIC3.94□□□□□ -1.78
PER3P56645 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.94□□□□□ -1.78
PER3P56645 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.94□□□□□ -1.78
PER3P56645 AC091905.2-201ENST00000623143 306 ntBASIC3.94□□□□□ -1.78
PER3P56645 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.94□□□□□ -1.78
PER3P56645 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.94□□□□□ -1.78
PER3P56645 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.94□□□□□ -1.78
PER3P56645 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PER3P56645 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PER3P56645 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.94□□□□□ -1.78
PER3P56645 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PER3P56645 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PER3P56645 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PER3P56645 FAM35DP-201ENST00000323387 2712 ntBASIC3.93□□□□□ -1.78
PER3P56645 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PER3P56645 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PER3P56645 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
PER3P56645 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PER3P56645 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PER3P56645 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
PER3P56645 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PER3P56645 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PER3P56645 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.93□□□□□ -1.78
PER3P56645 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PER3P56645 MIR331-201ENST00000362302 94 ntBASIC3.93□□□□□ -1.78
PER3P56645 RNU6-525P-201ENST00000363685 104 ntBASIC3.93□□□□□ -1.78
PER3P56645 RNU6-1013P-201ENST00000384180 107 ntBASIC3.93□□□□□ -1.78
PER3P56645 MIR3065-201ENST00000390137 79 ntBASIC3.93□□□□□ -1.78
PER3P56645 AL356057.2-201ENST00000403318 432 ntBASIC3.93□□□□□ -1.78
PER3P56645 MIR548K-201ENST00000408406 116 ntBASIC3.93□□□□□ -1.78
PER3P56645 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.93□□□□□ -1.78
PER3P56645 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.93□□□□□ -1.78
PER3P56645 AL354751.2-201ENST00000415471 210 ntBASIC3.93□□□□□ -1.78
PER3P56645 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.93□□□□□ -1.78
PER3P56645 AC018644.1-201ENST00000429934 551 ntBASIC3.93□□□□□ -1.78
PER3P56645 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.93□□□□□ -1.78
PER3P56645 AC005019.1-201ENST00000436455 431 ntBASIC3.93□□□□□ -1.78
PER3P56645 RPS24P13-201ENST00000442520 397 ntBASIC3.93□□□□□ -1.78
PER3P56645 HMGB3P22-202ENST00000451823 572 ntBASIC3.93□□□□□ -1.78
PER3P56645 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.93□□□□□ -1.78
PER3P56645 DHFRP3-201ENST00000455595 559 ntBASIC3.93□□□□□ -1.78
PER3P56645 snoU13.4-201ENST00000458916 104 ntBASIC3.93□□□□□ -1.78
PER3P56645 AC087884.1-201ENST00000469738 328 ntBASIC3.93□□□□□ -1.78
PER3P56645 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.93□□□□□ -1.78
PER3P56645 RPL7P5-201ENST00000471472 736 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms