Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GRIK1P39086 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
GRIK1P39086 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GRIK1P39086 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.91□□□□□ -1.62
GRIK1P39086 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
GRIK1P39086 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
GRIK1P39086 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.9□□□□□ -1.62
GRIK1P39086 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
GRIK1P39086 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.9□□□□□ -1.62
GRIK1P39086 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
GRIK1P39086 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
GRIK1P39086 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.9□□□□□ -1.62
GRIK1P39086 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.9□□□□□ -1.63
GRIK1P39086 RNU6-1290P-201ENST00000362957 109 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 Y_RNA.399-201ENST00000383955 105 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 RNU6-708P-201ENST00000384217 107 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 U3.29-201ENST00000391296 212 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 RPL36AP10-201ENST00000421785 322 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 CALM2P2-201ENST00000428512 440 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 RPS27AP12-201ENST00000429552 465 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 RPL29P29-201ENST00000448725 423 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.9□□□□□ -1.63
GRIK1P39086 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.9□□□□□ -1.63
GRIK1P39086 AC007016.1-201ENST00000512110 244 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 RNU4-71P-201ENST00000516258 113 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 AP001781.1-201ENST00000530977 207 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 CBX3P4-201ENST00000538909 354 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 MIR4643-201ENST00000577473 78 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 MIR4458-201ENST00000578872 75 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 MIR4697-201ENST00000582977 78 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.9□□□□□ -1.63
GRIK1P39086 AC012669.1-201ENST00000603209 283 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 AC073657.2-201ENST00000605661 303 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 AC002044.1-201ENST00000606707 158 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.9□□□□□ -1.63
GRIK1P39086 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.9□□□□□ -1.63
GRIK1P39086 NXPH1-205ENST00000602349 1953 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.9□□□□□ -1.63
GRIK1P39086 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
GRIK1P39086 AL391684.1-202ENST00000641293 1636 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 MAPK10-320ENST00000641462 6696 ntBASIC4.9□□□□□ -1.63
GRIK1P39086 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
GRIK1P39086 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GRIK1P39086 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GRIK1P39086 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
GRIK1P39086 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
GRIK1P39086 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GRIK1P39086 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GRIK1P39086 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GRIK1P39086 RNU6-704P-201ENST00000364162 103 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 RNU6-715P-201ENST00000365204 103 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GRIK1P39086 Y_RNA.471-201ENST00000384312 102 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 RNU6-378P-201ENST00000384324 107 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 RNU6-393P-201ENST00000384475 107 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 Y_RNA.577-201ENST00000384794 101 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 RPS4XP7-201ENST00000406274 780 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 RNA5SP107-201ENST00000411358 122 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.89□□□□□ -1.63
GRIK1P39086 CKS1BP6-201ENST00000424932 240 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 RPL23AP1-201ENST00000428990 471 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 RPL23AP69-201ENST00000431134 458 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 RPL36AP6-201ENST00000435770 321 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GRIK1P39086 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.89□□□□□ -1.63
GRIK1P39086 RNU7-59P-201ENST00000459101 61 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.89□□□□□ -1.63
GRIK1P39086 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.89□□□□□ -1.63
GRIK1P39086 AL139099.1-201ENST00000497398 403 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 COX7A2P2-201ENST00000505291 250 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.89□□□□□ -1.63
GRIK1P39086 RNU6-1092P-201ENST00000516955 87 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 DEFB108E-201ENST00000524692 240 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.89□□□□□ -1.63
GRIK1P39086 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.89□□□□□ -1.63
GRIK1P39086 RPL21P7-201ENST00000557463 483 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.89□□□□□ -1.63
GRIK1P39086 MIR1244-1-201ENST00000612829 85 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 AL138825.1-201ENST00000618587 192 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 MIR6758-201ENST00000620653 63 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 AL365265.1-201ENST00000621045 234 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 MIR1244-3-201ENST00000635744 85 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 MIR1244-2-201ENST00000636449 85 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 MIR1244-4-202ENST00000636813 85 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GRIK1P39086 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.89□□□□□ -1.63
GRIK1P39086 OR14L1P-202ENST00000641545 3009 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 AC010300.1-201ENST00000600671 5134 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
GRIK1P39086 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GRIK1P39086 AC090740.1-201ENST00000623193 2262 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.89□□□□□ -1.63
GRIK1P39086 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
GRIK1P39086 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.89□□□□□ -1.63
GRIK1P39086 SDAD1P2-201ENST00000441308 2028 ntBASIC4.89□□□□□ -1.63
GRIK1P39086 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.89□□□□□ -1.63
GRIK1P39086 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GRIK1P39086 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GRIK1P39086 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms