Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.1□□□□□ -1.91
TO15178 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.1□□□□□ -1.91
TO15178 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.1□□□□□ -1.91
TO15178 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.1□□□□□ -1.91
TO15178 AC005476.1-201ENST00000554427 397 ntBASIC3.1□□□□□ -1.91
TO15178 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.1□□□□□ -1.91
TO15178 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.1□□□□□ -1.91
TO15178 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.1□□□□□ -1.91
TO15178 AC090617.7-201ENST00000623952 126 ntBASIC3.1□□□□□ -1.91
TO15178 AC007785.2-201ENST00000598627 1916 ntBASIC3.1□□□□□ -1.91
TO15178 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TO15178 TPTE2P4-201ENST00000258589 1605 ntBASIC3.1□□□□□ -1.91
TO15178 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.1□□□□□ -1.91
TO15178 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
TO15178 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TO15178 AC091564.4-201ENST00000533934 2194 ntBASIC3.1□□□□□ -1.91
TO15178 AC004972.1-201ENST00000623934 2209 ntBASIC3.09□□□□□ -1.91
TO15178 AP003122.5-201ENST00000527668 3766 ntBASIC3.09□□□□□ -1.91
TO15178 MTCO1P12-201ENST00000414273 1543 ntBASIC3.09□□□□□ -1.91
TO15178 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
TO15178 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TO15178 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.09□□□□□ -1.91
TO15178 AC092447.7-201ENST00000422212 1621 ntBASIC3.09□□□□□ -1.91
TO15178 Z83843.1-201ENST00000604070 3685 ntBASIC3.09□□□□□ -1.91
TO15178 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TO15178 OR5J1P-201ENST00000313544 939 ntBASIC3.09□□□□□ -1.91
TO15178 RNA5SP197-201ENST00000363357 119 ntBASIC3.09□□□□□ -1.91
TO15178 RNU4-75P-201ENST00000364621 146 ntBASIC3.09□□□□□ -1.91
TO15178 MIR670-201ENST00000390142 98 ntBASIC3.09□□□□□ -1.91
TO15178 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TO15178 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TO15178 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.09□□□□□ -1.91
TO15178 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.09□□□□□ -1.91
TO15178 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.09□□□□□ -1.91
TO15178 AC091390.3-201ENST00000426478 338 ntBASIC3.09□□□□□ -1.91
TO15178 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.09□□□□□ -1.91
TO15178 SAR1AP4-201ENST00000429225 591 ntBASIC3.09□□□□□ -1.91
TO15178 RPL23AP69-201ENST00000431134 458 ntBASIC3.09□□□□□ -1.91
TO15178 HMGB1P27-201ENST00000431429 603 ntBASIC3.09□□□□□ -1.91
TO15178 AC009969.1-201ENST00000438726 172 ntBASIC3.09□□□□□ -1.91
TO15178 HMGB3P12-201ENST00000438745 556 ntBASIC3.09□□□□□ -1.91
TO15178 ATP5C1P1-201ENST00000441945 895 ntBASIC3.09□□□□□ -1.91
TO15178 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TO15178 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.09□□□□□ -1.91
TO15178 AC013267.1-201ENST00000458227 267 ntBASIC3.09□□□□□ -1.91
TO15178 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.09□□□□□ -1.91
TO15178 RPS3AP17-201ENST00000472594 777 ntBASIC3.09□□□□□ -1.91
TO15178 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.09□□□□□ -1.91
TO15178 AL358832.1-201ENST00000497800 389 ntBASIC3.09□□□□□ -1.91
TO15178 AC138853.1-201ENST00000503549 823 ntBASIC3.09□□□□□ -1.91
TO15178 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.09□□□□□ -1.91
TO15178 AC006445.2-201ENST00000510061 472 ntBASIC3.09□□□□□ -1.91
TO15178 TTC39CP1-201ENST00000512513 755 ntBASIC3.09□□□□□ -1.91
TO15178 APOOP4-201ENST00000513530 597 ntBASIC3.09□□□□□ -1.91
TO15178 MIR2276-201ENST00000516886 89 ntBASIC3.09□□□□□ -1.91
TO15178 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
TO15178 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
TO15178 AC068657.1-201ENST00000520807 306 ntBASIC3.09□□□□□ -1.91
TO15178 AP006587.4-201ENST00000526053 529 ntBASIC3.09□□□□□ -1.91
TO15178 CASP1P1-201ENST00000526345 212 ntBASIC3.09□□□□□ -1.91
TO15178 AP003072.2-201ENST00000527756 676 ntBASIC3.09□□□□□ -1.91
TO15178 AP000867.2-201ENST00000532468 320 ntBASIC3.09□□□□□ -1.91
TO15178 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.09□□□□□ -1.91
TO15178 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TO15178 NCAPGP2-201ENST00000557911 754 ntBASIC3.09□□□□□ -1.91
TO15178 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.09□□□□□ -1.91
TO15178 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.09□□□□□ -1.91
TO15178 SNORD39.4-201ENST00000620099 78 ntBASIC3.09□□□□□ -1.91
TO15178 AC007998.5-201ENST00000622938 237 ntBASIC3.09□□□□□ -1.91
TO15178 AC027309.3-201ENST00000623419 351 ntBASIC3.09□□□□□ -1.91
TO15178 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.09□□□□□ -1.91
TO15178 AC093908.1-201ENST00000623125 8092 ntBASIC3.09□□□□□ -1.92
TO15178 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TO15178 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.09□□□□□ -1.92
TO15178 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.09□□□□□ -1.92
TO15178 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TO15178 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
TO15178 FAM35BP-202ENST00000497389 3337 ntBASIC3.08□□□□□ -1.92
TO15178 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TO15178 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TO15178 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TO15178 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TO15178 MIR30E-201ENST00000362104 92 ntBASIC3.08□□□□□ -1.92
TO15178 RNU6-39P-201ENST00000384344 107 ntBASIC3.08□□□□□ -1.92
TO15178 MIR558-201ENST00000384920 94 ntBASIC3.08□□□□□ -1.92
TO15178 RNA5SP171-201ENST00000391071 115 ntBASIC3.08□□□□□ -1.92
TO15178 RNU2-66P-201ENST00000410650 161 ntBASIC3.08□□□□□ -1.92
TO15178 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.08□□□□□ -1.92
TO15178 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TO15178 NDUFB4P5-201ENST00000415445 361 ntBASIC3.08□□□□□ -1.92
TO15178 Z85995.1-201ENST00000415547 335 ntBASIC3.08□□□□□ -1.92
TO15178 AL356968.1-201ENST00000416622 474 ntBASIC3.08□□□□□ -1.92
TO15178 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.08□□□□□ -1.92
TO15178 MED13P1-201ENST00000428342 171 ntBASIC3.08□□□□□ -1.92
TO15178 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.08□□□□□ -1.92
TO15178 AL589823.1-201ENST00000429577 183 ntBASIC3.08□□□□□ -1.92
TO15178 AL358934.1-201ENST00000432346 324 ntBASIC3.08□□□□□ -1.92
TO15178 OR2B8P-201ENST00000432841 938 ntBASIC3.08□□□□□ -1.92
TO15178 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.08□□□□□ -1.92
TO15178 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms