Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TCRBV5S1A1TA0A578 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AL365440.1-201ENST00000436135 2167 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU6-1287P-201ENST00000362914 107 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 Y_RNA.373-201ENST00000365600 103 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AP002088.1-201ENST00000382740 395 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU6-1060P-201ENST00000384664 107 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 Y_RNA.576-201ENST00000384781 102 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 TXNP7-201ENST00000406296 293 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 FAT1P1-201ENST00000406588 507 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU2-43P-201ENST00000410306 190 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AC018630.2-202ENST00000422992 927 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AL133547.1-201ENST00000448546 220 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AL590639.1-201ENST00000456484 337 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU6-329P-201ENST00000459618 107 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 RPL23AP55-201ENST00000498163 452 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AC104806.1-201ENST00000508720 308 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 TRMT10BP1-201ENST00000519377 943 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AC018630.1-201ENST00000541376 925 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 TGIF1P1-201ENST00000558095 802 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 MIR4742-201ENST00000581069 85 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AC135507.2-201ENST00000612443 309 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 uc_338.34-201ENST00000617467 174 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 U7.8-201ENST00000619968 63 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 AC032011.1-201ENST00000611703 1549 ntBASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.64□□□□□ -1.83
TCRBV5S1A1TA0A578 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 DDX18P3-201ENST00000404856 2007 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AL645937.1-201ENST00000641739 1652 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 SNORA23-201ENST00000365128 182 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU1-64P-201ENST00000365443 163 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 SNORD17-201ENST00000390930 237 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 RN7SKP202-201ENST00000410439 330 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AC093106.2-201ENST00000428212 385 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 CALM2P2-201ENST00000428512 440 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AC018644.1-201ENST00000429934 551 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AC090774.1-201ENST00000435925 246 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AL359073.1-201ENST00000448036 403 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 HMGN1P13-201ENST00000505795 138 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AC108078.2-201ENST00000510750 236 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 TTC39CP1-201ENST00000512513 755 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 RNU6-390P-201ENST00000516259 103 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 Y_RNA.701-201ENST00000516812 110 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AL121603.1-201ENST00000553815 142 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 RNA5SP108-201ENST00000605921 117 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AL442067.2-201ENST00000614033 363 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 AL513302.2-201ENST00000562313 1842 ntBASIC3.63□□□□□ -1.83
TCRBV5S1A1TA0A578 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 MIR184-201ENST00000384962 84 ntBASIC3.62□□□□□ -1.83
TCRBV5S1A1TA0A578 AL356057.2-201ENST00000403318 432 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms