Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX11Q9Y5W9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SNX11Q9Y5W9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.89■□□□□ 0.62
SNX11Q9Y5W9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SNX11Q9Y5W9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNX11Q9Y5W9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 RNF165-205ENST00000588679 2904 ntBASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 AC116407.4-201ENST00000623319 1061 ntBASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 KRT8P11-201ENST00000409686 1436 ntBASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.89■□□□□ 0.61
SNX11Q9Y5W9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX11Q9Y5W9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 VENTXP5-201ENST00000523979 775 ntBASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX11Q9Y5W9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 AP000523.1-201ENST00000398242 1049 ntBASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 DUSP5P1-201ENST00000441325 1139 ntBASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 AC112907.2-201ENST00000448639 330 ntBASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 AC125437.2-201ENST00000625180 2167 ntBASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX11Q9Y5W9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms