Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 GOLGA6L5P-202ENST00000515341 1828 ntBASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 MIR3180-1-201ENST00000580374 94 ntBASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 MIR3180-3-201ENST00000584616 94 ntBASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDK11AQ9UQ88 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC29.45■■■□□ 2.31
CDK11AQ9UQ88 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.3
CDK11AQ9UQ88 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CDK11AQ9UQ88 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC29.45■■■□□ 2.3
CDK11AQ9UQ88 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 HLA-F-220ENST00000434407 884 ntBASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 SKP2-204ENST00000508514 821 ntTSL 3 BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CDK11AQ9UQ88 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDK11AQ9UQ88 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC29.43■■■□□ 2.3
CDK11AQ9UQ88 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CDK11AQ9UQ88 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDK11AQ9UQ88 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
CDK11AQ9UQ88 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CDK11AQ9UQ88 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC29.43■■■□□ 2.3
CDK11AQ9UQ88 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
CDK11AQ9UQ88 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDK11AQ9UQ88 TCF3P1-201ENST00000423021 1937 ntBASIC29.43■■■□□ 2.3
CDK11AQ9UQ88 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CDK11AQ9UQ88 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDK11AQ9UQ88 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 AL162741.1-201ENST00000565563 1558 ntBASIC29.42■■■□□ 2.3
CDK11AQ9UQ88 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 AP002383.4-201ENST00000442518 975 ntBASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 KRT8P26-201ENST00000534154 1276 ntBASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 AC079602.3-201ENST00000623931 403 ntBASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 AC112497.1-201ENST00000624824 639 ntBASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 AC093525.10-201ENST00000625130 1569 ntBASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 WDR6-223ENST00000627177 207 ntTSL 2 BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDK11AQ9UQ88 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC29.4■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms