Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 AC090616.6-201ENST00000582640 721 ntBASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 REXO1L6P-202ENST00000619970 1078 ntBASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZC3H4Q9UPT8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ZC3H4Q9UPT8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.08■■□□□ 1.29
ZC3H4Q9UPT8 SEC1P-202ENST00000473944 940 ntBASIC23.08■■□□□ 1.29
ZC3H4Q9UPT8 AL773604.1-201ENST00000617417 272 ntBASIC23.08■■□□□ 1.29
ZC3H4Q9UPT8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZC3H4Q9UPT8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
ZC3H4Q9UPT8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
ZC3H4Q9UPT8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZC3H4Q9UPT8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.08■■□□□ 1.28
ZC3H4Q9UPT8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.08■■□□□ 1.28
ZC3H4Q9UPT8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ZC3H4Q9UPT8 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.08■■□□□ 1.28
ZC3H4Q9UPT8 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.08■■□□□ 1.28
ZC3H4Q9UPT8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC23.08■■□□□ 1.28
ZC3H4Q9UPT8 AC074051.2-201ENST00000565115 352 ntBASIC23.08■■□□□ 1.28
ZC3H4Q9UPT8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ZC3H4Q9UPT8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 AL391807.1-203ENST00000604392 2365 ntBASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 RNPS1P1-201ENST00000507437 918 ntBASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 SLC25A1P1-201ENST00000528351 927 ntBASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 RNF126P1-202ENST00000569893 925 ntBASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.07■■□□□ 1.28
ZC3H4Q9UPT8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ZC3H4Q9UPT8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZC3H4Q9UPT8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.06■■□□□ 1.28
ZC3H4Q9UPT8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
ZC3H4Q9UPT8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
ZC3H4Q9UPT8 BX842568.4-201ENST00000421222 227 ntBASIC23.06■■□□□ 1.28
ZC3H4Q9UPT8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.06■■□□□ 1.28
ZC3H4Q9UPT8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.06■■□□□ 1.28
ZC3H4Q9UPT8 Z69720.1-201ENST00000601483 472 ntBASIC23.06■■□□□ 1.28
ZC3H4Q9UPT8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.06■■□□□ 1.28
ZC3H4Q9UPT8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
ZC3H4Q9UPT8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.05■■□□□ 1.28
ZC3H4Q9UPT8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 AC233702.3-201ENST00000578656 1387 ntBASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 HMGN1P19-201ENST00000436976 333 ntBASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms