Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.29■□□□□ 0.68
HACD3Q9P035 TSPY21P-201ENST00000433481 731 ntBASIC19.29■□□□□ 0.68
HACD3Q9P035 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.29■□□□□ 0.68
HACD3Q9P035 Z85996.1-201ENST00000494644 937 ntBASIC19.29■□□□□ 0.68
HACD3Q9P035 CR392000.1-201ENST00000624770 1228 ntBASIC19.29■□□□□ 0.68
HACD3Q9P035 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HACD3Q9P035 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HACD3Q9P035 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HACD3Q9P035 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HACD3Q9P035 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HACD3Q9P035 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.29■□□□□ 0.68
HACD3Q9P035 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.29■□□□□ 0.68
HACD3Q9P035 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HACD3Q9P035 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HACD3Q9P035 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HACD3Q9P035 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HACD3Q9P035 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HACD3Q9P035 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.28■□□□□ 0.68
HACD3Q9P035 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HACD3Q9P035 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.28■□□□□ 0.68
HACD3Q9P035 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HACD3Q9P035 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.28■□□□□ 0.68
HACD3Q9P035 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HACD3Q9P035 AC141586.3-201ENST00000562166 1838 ntBASIC19.28■□□□□ 0.68
HACD3Q9P035 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.28■□□□□ 0.68
HACD3Q9P035 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HACD3Q9P035 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HACD3Q9P035 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HACD3Q9P035 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HACD3Q9P035 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HACD3Q9P035 MIR718-201ENST00000390190 70 ntBASIC19.28■□□□□ 0.68
HACD3Q9P035 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.28■□□□□ 0.68
HACD3Q9P035 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.28■□□□□ 0.68
HACD3Q9P035 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.28■□□□□ 0.68
HACD3Q9P035 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.28■□□□□ 0.68
HACD3Q9P035 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.28■□□□□ 0.68
HACD3Q9P035 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HACD3Q9P035 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HACD3Q9P035 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HACD3Q9P035 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HACD3Q9P035 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
HACD3Q9P035 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.27■□□□□ 0.68
HACD3Q9P035 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.27■□□□□ 0.68
HACD3Q9P035 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.27■□□□□ 0.68
HACD3Q9P035 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.27■□□□□ 0.68
HACD3Q9P035 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.27■□□□□ 0.68
HACD3Q9P035 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.27■□□□□ 0.68
HACD3Q9P035 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HACD3Q9P035 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HACD3Q9P035 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.27■□□□□ 0.67
HACD3Q9P035 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HACD3Q9P035 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HACD3Q9P035 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.27■□□□□ 0.67
HACD3Q9P035 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.26■□□□□ 0.67
HACD3Q9P035 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HACD3Q9P035 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.26■□□□□ 0.67
HACD3Q9P035 KRT8P41-201ENST00000533985 1514 ntBASIC19.26■□□□□ 0.67
HACD3Q9P035 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.26■□□□□ 0.67
HACD3Q9P035 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HACD3Q9P035 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HACD3Q9P035 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 AC008550.1-201ENST00000511500 884 ntBASIC19.26■□□□□ 0.67
HACD3Q9P035 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.26■□□□□ 0.67
HACD3Q9P035 CD177P1-201ENST00000606252 935 ntBASIC19.26■□□□□ 0.67
HACD3Q9P035 AL049637.2-201ENST00000641778 930 ntBASIC19.26■□□□□ 0.67
HACD3Q9P035 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.26■□□□□ 0.67
HACD3Q9P035 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.26■□□□□ 0.67
HACD3Q9P035 TEX21P-204ENST00000641479 1693 ntBASIC19.26■□□□□ 0.67
HACD3Q9P035 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
HACD3Q9P035 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HACD3Q9P035 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.26■□□□□ 0.67
HACD3Q9P035 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HACD3Q9P035 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HACD3Q9P035 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms