Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 FP475955.4-201ENST00000623131 1990 ntBASIC19.43■□□□□ 0.7
UBP1Q9NZI7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.43■□□□□ 0.7
UBP1Q9NZI7 TMEM191A-211ENST00000637163 1067 ntBASIC19.43■□□□□ 0.7
UBP1Q9NZI7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.43■□□□□ 0.7
UBP1Q9NZI7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBP1Q9NZI7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.42■□□□□ 0.7
UBP1Q9NZI7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBP1Q9NZI7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBP1Q9NZI7 KSR1P1-201ENST00000446298 240 ntBASIC19.42■□□□□ 0.7
UBP1Q9NZI7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.42■□□□□ 0.7
UBP1Q9NZI7 AL353708.3-201ENST00000610272 989 ntBASIC19.42■□□□□ 0.7
UBP1Q9NZI7 AC131212.4-201ENST00000623606 975 ntBASIC19.42■□□□□ 0.7
UBP1Q9NZI7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.42■□□□□ 0.7
UBP1Q9NZI7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
UBP1Q9NZI7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBP1Q9NZI7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UBP1Q9NZI7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBP1Q9NZI7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.42■□□□□ 0.7
UBP1Q9NZI7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBP1Q9NZI7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBP1Q9NZI7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 AL353807.1-201ENST00000427475 662 ntBASIC19.41■□□□□ 0.7
UBP1Q9NZI7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 UBE2SP1-201ENST00000450587 669 ntBASIC19.41■□□□□ 0.7
UBP1Q9NZI7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.41■□□□□ 0.7
UBP1Q9NZI7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 KRT16P1-201ENST00000399124 1418 ntBASIC19.41■□□□□ 0.7
UBP1Q9NZI7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBP1Q9NZI7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 FAM197Y1-201ENST00000421178 764 ntBASIC19.4■□□□□ 0.7
UBP1Q9NZI7 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.4■□□□□ 0.7
UBP1Q9NZI7 TSPY23P-201ENST00000440136 739 ntBASIC19.4■□□□□ 0.7
UBP1Q9NZI7 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.4■□□□□ 0.7
UBP1Q9NZI7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBP1Q9NZI7 AL020996.1-203ENST00000536896 2307 ntBASIC19.4■□□□□ 0.7
UBP1Q9NZI7 AC093503.3-201ENST00000624917 2352 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms