Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AP003071.4-201ENST00000562276 1284 ntBASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 REXO1L10P-201ENST00000615707 1290 ntBASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CUEDC1Q9NWM3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 AC141586.3-201ENST00000562166 1838 ntBASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 AC116562.2-201ENST00000507042 360 ntBASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CUEDC1Q9NWM3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 TSPY23P-201ENST00000440136 739 ntBASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 AC130371.2-201ENST00000619443 611 ntBASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 FSCN1P1-201ENST00000568912 1481 ntBASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CUEDC1Q9NWM3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUEDC1Q9NWM3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 KRT8P11-201ENST00000409686 1436 ntBASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms