Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.36■□□□□ 0.85
CISHQ9NSE2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CISHQ9NSE2 AC096733.2-201ENST00000609937 1394 ntBASIC20.36■□□□□ 0.85
CISHQ9NSE2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CISHQ9NSE2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 UNC93B2-201ENST00000285383 730 ntBASIC20.36■□□□□ 0.85
CISHQ9NSE2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CISHQ9NSE2 TSPY15P-201ENST00000457163 923 ntBASIC20.36■□□□□ 0.85
CISHQ9NSE2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.36■□□□□ 0.85
CISHQ9NSE2 AC097488.1-201ENST00000507834 756 ntBASIC20.36■□□□□ 0.85
CISHQ9NSE2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.36■□□□□ 0.85
CISHQ9NSE2 SLC25A1P4-201ENST00000567977 778 ntBASIC20.36■□□□□ 0.85
CISHQ9NSE2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.36■□□□□ 0.85
CISHQ9NSE2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
CISHQ9NSE2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.36■□□□□ 0.85
CISHQ9NSE2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CISHQ9NSE2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CISHQ9NSE2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CISHQ9NSE2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CISHQ9NSE2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CISHQ9NSE2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.35■□□□□ 0.85
CISHQ9NSE2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.35■□□□□ 0.85
CISHQ9NSE2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.35■□□□□ 0.85
CISHQ9NSE2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.35■□□□□ 0.85
CISHQ9NSE2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.35■□□□□ 0.85
CISHQ9NSE2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.35■□□□□ 0.85
CISHQ9NSE2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CISHQ9NSE2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.35■□□□□ 0.85
CISHQ9NSE2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.35■□□□□ 0.85
CISHQ9NSE2 AC079598.2-202ENST00000546624 1451 ntBASIC20.35■□□□□ 0.85
CISHQ9NSE2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CISHQ9NSE2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CISHQ9NSE2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CISHQ9NSE2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.35■□□□□ 0.85
CISHQ9NSE2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CISHQ9NSE2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CISHQ9NSE2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CISHQ9NSE2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.34■□□□□ 0.85
CISHQ9NSE2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CISHQ9NSE2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CISHQ9NSE2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CISHQ9NSE2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CISHQ9NSE2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CISHQ9NSE2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CISHQ9NSE2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CISHQ9NSE2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.34■□□□□ 0.85
CISHQ9NSE2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CISHQ9NSE2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.34■□□□□ 0.85
CISHQ9NSE2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.34■□□□□ 0.85
CISHQ9NSE2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.34■□□□□ 0.85
CISHQ9NSE2 AP000525.1-201ENST00000608286 694 ntBASIC20.34■□□□□ 0.85
CISHQ9NSE2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CISHQ9NSE2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CISHQ9NSE2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CISHQ9NSE2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
CISHQ9NSE2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.34■□□□□ 0.85
CISHQ9NSE2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CISHQ9NSE2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CISHQ9NSE2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CISHQ9NSE2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.33■□□□□ 0.85
CISHQ9NSE2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CISHQ9NSE2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.33■□□□□ 0.85
CISHQ9NSE2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.33■□□□□ 0.85
CISHQ9NSE2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CISHQ9NSE2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CISHQ9NSE2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.33■□□□□ 0.85
CISHQ9NSE2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.33■□□□□ 0.85
CISHQ9NSE2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CISHQ9NSE2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CISHQ9NSE2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.33■□□□□ 0.85
CISHQ9NSE2 CRYGFP-201ENST00000418459 633 ntBASIC20.33■□□□□ 0.85
CISHQ9NSE2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CISHQ9NSE2 MFAP1P1-201ENST00000442257 1255 ntBASIC20.33■□□□□ 0.85
CISHQ9NSE2 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.33■□□□□ 0.85
CISHQ9NSE2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CISHQ9NSE2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CISHQ9NSE2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CISHQ9NSE2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.33■□□□□ 0.84
CISHQ9NSE2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CISHQ9NSE2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.33■□□□□ 0.84
CISHQ9NSE2 AP000974.1-201ENST00000623909 2387 ntBASIC20.32■□□□□ 0.84
CISHQ9NSE2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.32■□□□□ 0.84
CISHQ9NSE2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CISHQ9NSE2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CISHQ9NSE2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.32■□□□□ 0.84
CISHQ9NSE2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms