Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 NUDT16P1-203ENST00000513809 620 ntBASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 PRSS44-201ENST00000515154 1146 ntBASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 AC113410.3-201ENST00000623366 203 ntBASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.55■□□□□ 0.4
UBQLN4Q9NRR5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 B3GAT3P1-201ENST00000471720 806 ntBASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 AC011506.1-201ENST00000474329 610 ntBASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 AP000974.1-201ENST00000623909 2387 ntBASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 KRT8P11-201ENST00000409686 1436 ntBASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBQLN4Q9NRR5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 AC116562.2-201ENST00000507042 360 ntBASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UBQLN4Q9NRR5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 AL355355.2-201ENST00000442321 338 ntBASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 FAM207BP-201ENST00000447172 505 ntBASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms