Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 CYP2T1P-201ENST00000432607 1285 ntBASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 AC023632.3-201ENST00000521633 145 ntBASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 AC068418.2-201ENST00000577309 3703 ntBASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
C12orf4Q9NQ89 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 AL589743.5-201ENST00000616611 1050 ntBASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
C12orf4Q9NQ89 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 DUX4L16-201ENST00000555130 1264 ntBASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.54■□□□□ 0.24
C12orf4Q9NQ89 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms