Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 REXO1L10P-201ENST00000615707 1290 ntBASIC16.3■□□□□ 0.2
GCM1Q9NP62 REXO1L12P-201ENST00000622156 912 ntBASIC16.3■□□□□ 0.2
GCM1Q9NP62 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GCM1Q9NP62 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GCM1Q9NP62 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GCM1Q9NP62 PKD1P1-201ENST00000458669 6805 ntBASIC16.3■□□□□ 0.2
GCM1Q9NP62 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 MIR6786-201ENST00000616843 113 ntBASIC16.29■□□□□ 0.2
GCM1Q9NP62 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 RCC2P6-201ENST00000526625 1557 ntBASIC16.29■□□□□ 0.2
GCM1Q9NP62 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.29■□□□□ 0.2
GCM1Q9NP62 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GCM1Q9NP62 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 B3GAT3P1-201ENST00000471720 806 ntBASIC16.28■□□□□ 0.2
GCM1Q9NP62 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.28■□□□□ 0.2
GCM1Q9NP62 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GCM1Q9NP62 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.27■□□□□ 0.2
GCM1Q9NP62 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GCM1Q9NP62 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GCM1Q9NP62 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
GCM1Q9NP62 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GCM1Q9NP62 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GCM1Q9NP62 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GCM1Q9NP62 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GCM1Q9NP62 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GCM1Q9NP62 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GCM1Q9NP62 MESTP1-201ENST00000404287 994 ntBASIC16.27■□□□□ 0.2
GCM1Q9NP62 AC004951.3-201ENST00000418645 1148 ntBASIC16.27■□□□□ 0.2
GCM1Q9NP62 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.27■□□□□ 0.2
GCM1Q9NP62 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.27■□□□□ 0.2
GCM1Q9NP62 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GCM1Q9NP62 AC011506.1-201ENST00000474329 610 ntBASIC16.27■□□□□ 0.2
GCM1Q9NP62 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.27■□□□□ 0.2
GCM1Q9NP62 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GCM1Q9NP62 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.27■□□□□ 0.2
GCM1Q9NP62 AL355075.4-201ENST00000554988 638 ntBASIC16.27■□□□□ 0.2
GCM1Q9NP62 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GCM1Q9NP62 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms