Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 AL160237.2-201ENST00000556165 472 ntBASIC19.14■□□□□ 0.65
CHRDQ9H2X0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 AL121772.3-201ENST00000610840 674 ntBASIC19.14■□□□□ 0.65
CHRDQ9H2X0 AC006538.3-201ENST00000612495 578 ntBASIC19.14■□□□□ 0.65
CHRDQ9H2X0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRDQ9H2X0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CHRDQ9H2X0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRDQ9H2X0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CHRDQ9H2X0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRDQ9H2X0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRDQ9H2X0 MIR662-201ENST00000384847 95 ntBASIC19.13■□□□□ 0.65
CHRDQ9H2X0 AL023284.2-201ENST00000405850 579 ntBASIC19.13■□□□□ 0.65
CHRDQ9H2X0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.13■□□□□ 0.65
CHRDQ9H2X0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRDQ9H2X0 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.13■□□□□ 0.65
CHRDQ9H2X0 SEC1P-202ENST00000473944 940 ntBASIC19.13■□□□□ 0.65
CHRDQ9H2X0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.13■□□□□ 0.65
CHRDQ9H2X0 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.13■□□□□ 0.65
CHRDQ9H2X0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CHRDQ9H2X0 AC004263.2-201ENST00000617183 678 ntBASIC19.13■□□□□ 0.65
CHRDQ9H2X0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHRDQ9H2X0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRDQ9H2X0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 AC104417.2-201ENST00000562989 1793 ntBASIC19.12■□□□□ 0.65
CHRDQ9H2X0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 TSPY22P-201ENST00000427496 604 ntBASIC19.12■□□□□ 0.65
CHRDQ9H2X0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 TPSP2-201ENST00000561760 610 ntBASIC19.12■□□□□ 0.65
CHRDQ9H2X0 AC091304.2-201ENST00000564639 760 ntBASIC19.12■□□□□ 0.65
CHRDQ9H2X0 MIR3180-5-201ENST00000583743 153 ntBASIC19.12■□□□□ 0.65
CHRDQ9H2X0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 AL136038.4-201ENST00000603606 1261 ntBASIC19.12■□□□□ 0.65
CHRDQ9H2X0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDQ9H2X0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 AC079781.3-201ENST00000449110 356 ntBASIC19.11■□□□□ 0.65
CHRDQ9H2X0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 LINC01711-201ENST00000598340 967 ntBASIC19.11■□□□□ 0.65
CHRDQ9H2X0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDQ9H2X0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 AP000867.3-201ENST00000524675 377 ntBASIC19.1■□□□□ 0.65
CHRDQ9H2X0 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.1■□□□□ 0.65
CHRDQ9H2X0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms