Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF39Q9H2S5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 AC008764.6-201ENST00000595909 2069 ntBASIC21.09■□□□□ 0.97
RNF39Q9H2S5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 AL138729.1-201ENST00000406666 664 ntBASIC21.09■□□□□ 0.97
RNF39Q9H2S5 CRYGFP-201ENST00000418459 633 ntBASIC21.09■□□□□ 0.97
RNF39Q9H2S5 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 MTND4P32-201ENST00000437189 1237 ntBASIC21.09■□□□□ 0.97
RNF39Q9H2S5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 RN7SL850P-201ENST00000579959 291 ntBASIC21.09■□□□□ 0.97
RNF39Q9H2S5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 AC010331.1-201ENST00000611423 582 ntBASIC21.09■□□□□ 0.97
RNF39Q9H2S5 IL31RA-208ENST00000611895 1171 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 AL118556.2-201ENST00000614375 824 ntBASIC21.09■□□□□ 0.97
RNF39Q9H2S5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
RNF39Q9H2S5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 AC091390.4-202ENST00000476426 537 ntBASIC21.08■□□□□ 0.97
RNF39Q9H2S5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 ZEB2P1-202ENST00000572816 902 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF39Q9H2S5 AC093424.1-201ENST00000604999 338 ntBASIC21.08■□□□□ 0.97
RNF39Q9H2S5 AP000692.2-201ENST00000608391 879 ntBASIC21.08■□□□□ 0.97
RNF39Q9H2S5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RNF39Q9H2S5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF39Q9H2S5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF39Q9H2S5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 AC004951.3-201ENST00000418645 1148 ntBASIC21.07■□□□□ 0.96
RNF39Q9H2S5 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 AL121578.1-201ENST00000428051 892 ntBASIC21.07■□□□□ 0.96
RNF39Q9H2S5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 LINC02509-201ENST00000508790 691 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 SLC25A1P4-201ENST00000567977 778 ntBASIC21.07■□□□□ 0.96
RNF39Q9H2S5 AP001505.1-201ENST00000569966 824 ntBASIC21.07■□□□□ 0.96
RNF39Q9H2S5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 AP005242.2-201ENST00000580065 1175 ntBASIC21.07■□□□□ 0.96
RNF39Q9H2S5 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.07■□□□□ 0.96
RNF39Q9H2S5 DGCR10-201ENST00000609839 495 ntBASIC21.07■□□□□ 0.96
RNF39Q9H2S5 AC063944.3-201ENST00000609969 533 ntBASIC21.07■□□□□ 0.96
RNF39Q9H2S5 AL035425.4-201ENST00000624509 1063 ntBASIC21.07■□□□□ 0.96
RNF39Q9H2S5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms