Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 AC083880.1-201ENST00000608266 535 ntBASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 SDHAP1-207ENST00000440850 2000 ntBASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2J3Q9H1A7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 AC093525.10-201ENST00000625130 1569 ntBASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 SOX15-203ENST00000570788 1093 ntBASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2J3Q9H1A7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 MIR935-201ENST00000401179 91 ntBASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2J3Q9H1A7 AC005082.1-201ENST00000413042 2259 ntBASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 AL031598.1-201ENST00000561511 1773 ntBASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 IRX1P1-201ENST00000438849 1838 ntBASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 AC069152.1-201ENST00000438030 544 ntBASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms