Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11YQ9BZA8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 AL136038.4-201ENST00000603606 1261 ntBASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 AC112497.1-201ENST00000624824 639 ntBASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 AC092667.1-201ENST00000434301 2586 ntBASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11YQ9BZA8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 CHCHD2P8-201ENST00000429873 447 ntBASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 MIR3917-201ENST00000580971 93 ntBASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11YQ9BZA8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 AC004870.1-201ENST00000315132 882 ntBASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDH11YQ9BZA8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11YQ9BZA8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
PCDH11YQ9BZA8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH11YQ9BZA8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDH11YQ9BZA8 MIR662-201ENST00000384847 95 ntBASIC24.71■■□□□ 1.55
PCDH11YQ9BZA8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH11YQ9BZA8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH11YQ9BZA8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDH11YQ9BZA8 FDX1P1-201ENST00000449115 551 ntBASIC24.71■■□□□ 1.55
PCDH11YQ9BZA8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH11YQ9BZA8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDH11YQ9BZA8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms