Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH11XQ9BZA7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 AL136038.4-201ENST00000603606 1261 ntBASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 AC112497.1-201ENST00000624824 639 ntBASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 AC092667.1-201ENST00000434301 2586 ntBASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH11XQ9BZA7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 CHCHD2P8-201ENST00000429873 447 ntBASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 MIR3917-201ENST00000580971 93 ntBASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH11XQ9BZA7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 AC004870.1-201ENST00000315132 882 ntBASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDH11XQ9BZA7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH11XQ9BZA7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 MIR662-201ENST00000384847 95 ntBASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 FDX1P1-201ENST00000449115 551 ntBASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms