Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 CCDC47-207ENST00000612558 1586 ntTSL 5 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 POMP-202ENST00000460403 1428 ntTSL 3 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 SYCP3-201ENST00000266743 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 OR52E4-201ENST00000316987 1027 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 TP53TG3C-201ENST00000360260 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 FAM204BP-201ENST00000369171 701 ntBASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 NPM1P37-201ENST00000403105 874 ntBASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 CLIC4P3-201ENST00000422221 752 ntBASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 DPRXP1-201ENST00000426312 460 ntBASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AL390023.1-201ENST00000428836 262 ntBASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 MTCO2P18-201ENST00000457151 658 ntBASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 MTCYBP14-201ENST00000457471 715 ntBASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AC079953.1-201ENST00000472008 736 ntBASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 CASC8-201ENST00000501396 930 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 ANKRD33B-AS1-201ENST00000506304 522 ntTSL 5 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 MTND3P5-201ENST00000512798 333 ntBASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AC010476.1-201ENST00000519111 851 ntBASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 BCAS2P1-201ENST00000528022 632 ntBASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 TP53TG3-208ENST00000569420 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 TP53TG3B-205ENST00000569741 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 LINC00629-202ENST00000592070 844 ntTSL 3 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AL158211.4-201ENST00000606988 584 ntBASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 TP53TG3E-201ENST00000611321 1181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC11.81□□□□□ -0.52
KRTAP3-3Q9BYR6 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 AC073429.2-201ENST00000569694 1444 ntBASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 OR7A2P-201ENST00000304105 930 ntBASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 WFDC5-201ENST00000307971 1034 ntTSL 5 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 CFLAR-202ENST00000340870 963 ntTSL 5 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 AC019205.1-201ENST00000421830 730 ntBASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 AC099568.1-201ENST00000432395 509 ntTSL 3 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 MTCYBP21-201ENST00000443300 1113 ntBASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 PGBD4P4-201ENST00000509673 613 ntBASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 AC112198.4-201ENST00000515450 351 ntBASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 SCARNA15.1-201ENST00000516384 125 ntBASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 UTP23-203ENST00000517820 796 ntTSL 3 BASIC11.8□□□□□ -0.52
KRTAP3-3Q9BYR6 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms