Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PKP4Q99569 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.58■□□□□ 0.56
PKP4Q99569 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PKP4Q99569 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.57■□□□□ 0.56
PKP4Q99569 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PKP4Q99569 FEM1AP3-201ENST00000403722 1741 ntBASIC18.57■□□□□ 0.56
PKP4Q99569 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.57■□□□□ 0.56
PKP4Q99569 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.57■□□□□ 0.56
PKP4Q99569 FP475955.4-201ENST00000623131 1990 ntBASIC18.57■□□□□ 0.56
PKP4Q99569 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.57■□□□□ 0.56
PKP4Q99569 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.57■□□□□ 0.56
PKP4Q99569 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PKP4Q99569 AL355355.2-201ENST00000442321 338 ntBASIC18.57■□□□□ 0.56
PKP4Q99569 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.57■□□□□ 0.56
PKP4Q99569 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.57■□□□□ 0.56
PKP4Q99569 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
PKP4Q99569 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.57■□□□□ 0.56
PKP4Q99569 AC066615.1-201ENST00000640911 628 ntBASIC18.57■□□□□ 0.56
PKP4Q99569 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PKP4Q99569 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PKP4Q99569 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP4Q99569 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.57■□□□□ 0.56
PKP4Q99569 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP4Q99569 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP4Q99569 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP4Q99569 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP4Q99569 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PKP4Q99569 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PKP4Q99569 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PKP4Q99569 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PKP4Q99569 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.56■□□□□ 0.56
PKP4Q99569 FAM207BP-201ENST00000447172 505 ntBASIC18.56■□□□□ 0.56
PKP4Q99569 SNORA78-201ENST00000459373 127 ntBASIC18.56■□□□□ 0.56
PKP4Q99569 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.56■□□□□ 0.56
PKP4Q99569 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
PKP4Q99569 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PKP4Q99569 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PKP4Q99569 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.56■□□□□ 0.56
PKP4Q99569 REXO1L10P-201ENST00000615707 1290 ntBASIC18.56■□□□□ 0.56
PKP4Q99569 REXO1L12P-201ENST00000622156 912 ntBASIC18.56■□□□□ 0.56
PKP4Q99569 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PKP4Q99569 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.56■□□□□ 0.56
PKP4Q99569 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PKP4Q99569 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.56■□□□□ 0.56
PKP4Q99569 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP4Q99569 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP4Q99569 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PKP4Q99569 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP4Q99569 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.56■□□□□ 0.56
PKP4Q99569 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.56■□□□□ 0.56
PKP4Q99569 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP4Q99569 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.55■□□□□ 0.56
PKP4Q99569 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PKP4Q99569 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PKP4Q99569 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PKP4Q99569 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PKP4Q99569 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.55■□□□□ 0.56
PKP4Q99569 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.55■□□□□ 0.56
PKP4Q99569 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PKP4Q99569 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.55■□□□□ 0.56
PKP4Q99569 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 AP000974.1-201ENST00000623909 2387 ntBASIC18.55■□□□□ 0.56
PKP4Q99569 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP4Q99569 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms