Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHOX2BQ99453 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.27■□□□□ 0.68
PHOX2BQ99453 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHOX2BQ99453 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.27■□□□□ 0.68
PHOX2BQ99453 LINC00265-3P-201ENST00000447588 903 ntBASIC19.27■□□□□ 0.68
PHOX2BQ99453 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHOX2BQ99453 CA15P1-201ENST00000481698 905 ntBASIC19.27■□□□□ 0.68
PHOX2BQ99453 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.27■□□□□ 0.68
PHOX2BQ99453 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.27■□□□□ 0.68
PHOX2BQ99453 AC012615.1-201ENST00000565797 1299 ntBASIC19.27■□□□□ 0.68
PHOX2BQ99453 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.27■□□□□ 0.68
PHOX2BQ99453 NEK4P2-201ENST00000580004 1012 ntBASIC19.27■□□□□ 0.68
PHOX2BQ99453 AC140113.2-201ENST00000604370 208 ntBASIC19.27■□□□□ 0.68
PHOX2BQ99453 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.27■□□□□ 0.68
PHOX2BQ99453 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.27■□□□□ 0.68
PHOX2BQ99453 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHOX2BQ99453 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PHOX2BQ99453 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PHOX2BQ99453 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PHOX2BQ99453 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.27■□□□□ 0.67
PHOX2BQ99453 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHOX2BQ99453 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.26■□□□□ 0.67
PHOX2BQ99453 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHOX2BQ99453 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PHOX2BQ99453 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PHOX2BQ99453 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHOX2BQ99453 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHOX2BQ99453 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.26■□□□□ 0.67
PHOX2BQ99453 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PHOX2BQ99453 AC244107.1-201ENST00000442033 332 ntBASIC19.26■□□□□ 0.67
PHOX2BQ99453 AC073648.2-201ENST00000510116 352 ntBASIC19.26■□□□□ 0.67
PHOX2BQ99453 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHOX2BQ99453 TPSP2-201ENST00000561760 610 ntBASIC19.26■□□□□ 0.67
PHOX2BQ99453 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHOX2BQ99453 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.26■□□□□ 0.67
PHOX2BQ99453 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHOX2BQ99453 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.26■□□□□ 0.67
PHOX2BQ99453 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHOX2BQ99453 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.26■□□□□ 0.67
PHOX2BQ99453 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHOX2BQ99453 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.26■□□□□ 0.67
PHOX2BQ99453 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHOX2BQ99453 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.25■□□□□ 0.67
PHOX2BQ99453 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.25■□□□□ 0.67
PHOX2BQ99453 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.25■□□□□ 0.67
PHOX2BQ99453 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 Z85996.1-201ENST00000494644 937 ntBASIC19.25■□□□□ 0.67
PHOX2BQ99453 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.25■□□□□ 0.67
PHOX2BQ99453 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.25■□□□□ 0.67
PHOX2BQ99453 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.25■□□□□ 0.67
PHOX2BQ99453 AP001005.1-201ENST00000571755 1248 ntBASIC19.25■□□□□ 0.67
PHOX2BQ99453 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 TERC-201ENST00000602385 541 ntBASIC19.25■□□□□ 0.67
PHOX2BQ99453 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.25■□□□□ 0.67
PHOX2BQ99453 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.25■□□□□ 0.67
PHOX2BQ99453 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.25■□□□□ 0.67
PHOX2BQ99453 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PHOX2BQ99453 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHOX2BQ99453 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PHOX2BQ99453 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PHOX2BQ99453 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.24■□□□□ 0.67
PHOX2BQ99453 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.24■□□□□ 0.67
PHOX2BQ99453 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.24■□□□□ 0.67
PHOX2BQ99453 CHCHD2P8-201ENST00000429873 447 ntBASIC19.24■□□□□ 0.67
PHOX2BQ99453 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.24■□□□□ 0.67
PHOX2BQ99453 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 KRT8P26-201ENST00000534154 1276 ntBASIC19.24■□□□□ 0.67
PHOX2BQ99453 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.24■□□□□ 0.67
PHOX2BQ99453 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PHOX2BQ99453 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.24■□□□□ 0.67
PHOX2BQ99453 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PHOX2BQ99453 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PHOX2BQ99453 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHOX2BQ99453 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHOX2BQ99453 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms