Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 AL845331.1-201ENST00000424978 1190 ntBASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 CHCHD2P8-201ENST00000429873 447 ntBASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 FAAHP1-202ENST00000446499 1238 ntBASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 KRT17P6-201ENST00000453795 1220 ntBASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 MIR3917-201ENST00000580971 93 ntBASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 AC112497.1-201ENST00000624824 639 ntBASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CRAMP1Q96RY5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 AL136038.4-201ENST00000603606 1261 ntBASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 AL391807.1-203ENST00000604392 2365 ntBASIC23.34■■□□□ 1.33
CRAMP1Q96RY5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.33■■□□□ 1.33
CRAMP1Q96RY5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
CRAMP1Q96RY5 TCF3P1-201ENST00000423021 1937 ntBASIC23.33■■□□□ 1.32
CRAMP1Q96RY5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
CRAMP1Q96RY5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CRAMP1Q96RY5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CRAMP1Q96RY5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CRAMP1Q96RY5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CRAMP1Q96RY5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CRAMP1Q96RY5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.3■■□□□ 1.32
CRAMP1Q96RY5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CRAMP1Q96RY5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CRAMP1Q96RY5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CRAMP1Q96RY5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.3■■□□□ 1.32
CRAMP1Q96RY5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.3■■□□□ 1.32
CRAMP1Q96RY5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms