Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.17■□□□□ 0.82
CALR3Q96L12 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CALR3Q96L12 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CALR3Q96L12 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.17■□□□□ 0.82
CALR3Q96L12 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.17■□□□□ 0.82
CALR3Q96L12 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.17■□□□□ 0.82
CALR3Q96L12 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.17■□□□□ 0.82
CALR3Q96L12 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.17■□□□□ 0.82
CALR3Q96L12 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CALR3Q96L12 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CALR3Q96L12 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.16■□□□□ 0.82
CALR3Q96L12 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.16■□□□□ 0.82
CALR3Q96L12 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.16■□□□□ 0.82
CALR3Q96L12 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CALR3Q96L12 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.16■□□□□ 0.82
CALR3Q96L12 PRKY-204ENST00000533551 1019 ntBASIC20.16■□□□□ 0.82
CALR3Q96L12 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.16■□□□□ 0.82
CALR3Q96L12 SOX15-203ENST00000570788 1093 ntBASIC20.16■□□□□ 0.82
CALR3Q96L12 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.16■□□□□ 0.82
CALR3Q96L12 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.16■□□□□ 0.82
CALR3Q96L12 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.16■□□□□ 0.82
CALR3Q96L12 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CALR3Q96L12 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.16■□□□□ 0.82
CALR3Q96L12 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CALR3Q96L12 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CALR3Q96L12 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CALR3Q96L12 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.16■□□□□ 0.82
CALR3Q96L12 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CALR3Q96L12 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CALR3Q96L12 BICD1-207ENST00000551848 1962 ntBASIC20.15■□□□□ 0.82
CALR3Q96L12 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.15■□□□□ 0.82
CALR3Q96L12 AL160286.2-201ENST00000567150 934 ntBASIC20.15■□□□□ 0.82
CALR3Q96L12 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.15■□□□□ 0.82
CALR3Q96L12 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CALR3Q96L12 AC133041.1-202ENST00000642053 222 ntBASIC20.15■□□□□ 0.82
CALR3Q96L12 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
CALR3Q96L12 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
CALR3Q96L12 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CALR3Q96L12 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.15■□□□□ 0.82
CALR3Q96L12 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.15■□□□□ 0.82
CALR3Q96L12 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.15■□□□□ 0.82
CALR3Q96L12 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.15■□□□□ 0.82
CALR3Q96L12 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CALR3Q96L12 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CALR3Q96L12 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CALR3Q96L12 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.82
CALR3Q96L12 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.14■□□□□ 0.81
CALR3Q96L12 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CALR3Q96L12 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CALR3Q96L12 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CALR3Q96L12 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CALR3Q96L12 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CALR3Q96L12 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CALR3Q96L12 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms