Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 AC004264.1-201ENST00000608354 794 ntBASIC21■□□□□ 0.95
RPGRIP1Q96KN7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 AL032819.2-201ENST00000624543 2162 ntBASIC21■□□□□ 0.95
RPGRIP1Q96KN7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21■□□□□ 0.95
RPGRIP1Q96KN7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRIP1Q96KN7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 LETM1P2-201ENST00000597330 2178 ntBASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 FITM1-202ENST00000559294 800 ntBASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRIP1Q96KN7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 WWOX-216ENST00000569818 525 ntBASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 CR392000.1-201ENST00000624770 1228 ntBASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.97■□□□□ 0.95
RPGRIP1Q96KN7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms