Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 RCN1P1-201ENST00000400413 996 ntBASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 HMGA1P5-201ENST00000412453 271 ntBASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 FAM210CP-201ENST00000445714 574 ntBASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCD1Q96GM5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 TERF1P1-201ENST00000311003 1181 ntBASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 AC005521.1-201ENST00000393351 872 ntBASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.06■□□□□ 0.8
SMARCD1Q96GM5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 IRX1P1-201ENST00000438849 1838 ntBASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 AL137013.1-201ENST00000432946 1228 ntBASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 KRT18P21-201ENST00000515767 1272 ntBASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 AP003041.3-201ENST00000527151 707 ntBASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 FEM1AP3-201ENST00000403722 1741 ntBASIC20.05■□□□□ 0.8
SMARCD1Q96GM5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 LIN28AP1-201ENST00000429574 405 ntBASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SMARCD1Q96GM5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms