Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.67■□□□□ 0.9
PGBD4Q96DM1 MYC-208ENST00000641036 567 ntBASIC20.67■□□□□ 0.9
PGBD4Q96DM1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PGBD4Q96DM1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PGBD4Q96DM1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
PGBD4Q96DM1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PGBD4Q96DM1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PGBD4Q96DM1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.67■□□□□ 0.9
PGBD4Q96DM1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PGBD4Q96DM1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PGBD4Q96DM1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 AL023973.1-201ENST00000624619 620 ntBASIC20.66■□□□□ 0.9
PGBD4Q96DM1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PGBD4Q96DM1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 NEK4P2-201ENST00000580004 1012 ntBASIC20.65■□□□□ 0.9
PGBD4Q96DM1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PGBD4Q96DM1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
PGBD4Q96DM1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PGBD4Q96DM1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
PGBD4Q96DM1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.64■□□□□ 0.9
PGBD4Q96DM1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PGBD4Q96DM1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PGBD4Q96DM1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
PGBD4Q96DM1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
PGBD4Q96DM1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
PGBD4Q96DM1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.64■□□□□ 0.9
PGBD4Q96DM1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 AL031133.1-201ENST00000406807 723 ntBASIC20.64■□□□□ 0.89
PGBD4Q96DM1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 AL441883.1-201ENST00000566170 1045 ntBASIC20.64■□□□□ 0.89
PGBD4Q96DM1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 AC091076.1-201ENST00000610741 619 ntBASIC20.64■□□□□ 0.89
PGBD4Q96DM1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 SDHAP1-207ENST00000440850 2000 ntBASIC20.64■□□□□ 0.89
PGBD4Q96DM1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.64■□□□□ 0.89
PGBD4Q96DM1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.63■□□□□ 0.89
PGBD4Q96DM1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.63■□□□□ 0.89
PGBD4Q96DM1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PGBD4Q96DM1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PGBD4Q96DM1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
PGBD4Q96DM1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.63■□□□□ 0.89
PGBD4Q96DM1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PGBD4Q96DM1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PGBD4Q96DM1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PGBD4Q96DM1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PGBD4Q96DM1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.63■□□□□ 0.89
PGBD4Q96DM1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PGBD4Q96DM1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms