Protein–RNA interactions for Protein: Q96BQ5

CCDC127, Coiled-coil domain-containing protein 127, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127Q96BQ5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC127Q96BQ5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC127Q96BQ5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC127Q96BQ5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC127Q96BQ5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC127Q96BQ5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC127Q96BQ5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CCDC127Q96BQ5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
CCDC127Q96BQ5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.77■□□□□ 0.91
CCDC127Q96BQ5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC127Q96BQ5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC127Q96BQ5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 AL596275.1-201ENST00000423464 877 ntBASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 TSPY21P-201ENST00000433481 731 ntBASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 FAM207BP-201ENST00000447172 505 ntBASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 KRT8P11-201ENST00000409686 1436 ntBASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC127Q96BQ5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC127Q96BQ5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
CCDC127Q96BQ5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC127Q96BQ5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC127Q96BQ5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC127Q96BQ5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC127Q96BQ5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC127Q96BQ5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC127Q96BQ5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC127Q96BQ5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.73■□□□□ 0.91
CCDC127Q96BQ5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC127Q96BQ5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.73■□□□□ 0.91
CCDC127Q96BQ5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC127Q96BQ5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms