Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SH3KBP1Q96B97 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3KBP1Q96B97 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SH3KBP1Q96B97 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.87■□□□□ 0.61
SH3KBP1Q96B97 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.87■□□□□ 0.61
SH3KBP1Q96B97 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.87■□□□□ 0.61
SH3KBP1Q96B97 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3KBP1Q96B97 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.87■□□□□ 0.61
SH3KBP1Q96B97 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3KBP1Q96B97 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 MESTP1-201ENST00000404287 994 ntBASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 AC004951.3-201ENST00000418645 1148 ntBASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 AP005242.2-201ENST00000580065 1175 ntBASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 AC145285.6-201ENST00000604632 637 ntBASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 AC130371.2-201ENST00000619443 611 ntBASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 TREX1-205ENST00000625293 1783 ntBASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3KBP1Q96B97 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 AC011506.1-201ENST00000474329 610 ntBASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 C2orf69P3-201ENST00000565542 1120 ntBASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3KBP1Q96B97 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms