Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 COX11P1-201ENST00000489116 835 ntBASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 AC141257.4-201ENST00000634557 245 ntBASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 AC136944.6-201ENST00000634818 245 ntBASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.37■■□□□ 1.01
ATP6V0A1Q93050 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 FAM8A6P-201ENST00000407496 1135 ntBASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 TSPY5P-201ENST00000426936 936 ntBASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V0A1Q93050 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
ATP6V0A1Q93050 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 AL512604.3-201ENST00000569583 964 ntBASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V0A1Q93050 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 AC092647.4-201ENST00000457211 535 ntBASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.33■■□□□ 1.01
ATP6V0A1Q93050 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP6V0A1Q93050 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP6V0A1Q93050 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms