Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.06■□□□□ 0
NPIPB3Q92617 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NPIPB3Q92617 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.06■□□□□ 0
NPIPB3Q92617 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPIPB3Q92617 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NPIPB3Q92617 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
NPIPB3Q92617 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NPIPB3Q92617 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NPIPB3Q92617 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NPIPB3Q92617 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.05■□□□□ 0
NPIPB3Q92617 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.05■□□□□ 0
NPIPB3Q92617 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
NPIPB3Q92617 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NPIPB3Q92617 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.05■□□□□ 0
NPIPB3Q92617 AC009113.1-201ENST00000570267 2443 ntBASIC15.05■□□□□ 0
NPIPB3Q92617 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.05■□□□□ 0
NPIPB3Q92617 AC007613.1-201ENST00000572811 2597 ntBASIC15.05■□□□□ 0
NPIPB3Q92617 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NPIPB3Q92617 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
NPIPB3Q92617 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NPIPB3Q92617 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.05■□□□□ -0
NPIPB3Q92617 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.05■□□□□ -0
NPIPB3Q92617 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NPIPB3Q92617 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.05■□□□□ -0
NPIPB3Q92617 TUBB8P6-201ENST00000436895 1288 ntBASIC15.05■□□□□ -0
NPIPB3Q92617 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.05■□□□□ -0
NPIPB3Q92617 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.05■□□□□ -0
NPIPB3Q92617 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.05■□□□□ -0
NPIPB3Q92617 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.05■□□□□ -0
NPIPB3Q92617 AC120498.8-201ENST00000614275 531 ntBASIC15.05■□□□□ -0
NPIPB3Q92617 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.05■□□□□ -0
NPIPB3Q92617 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NPIPB3Q92617 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 AL031598.1-201ENST00000561511 1773 ntBASIC15.05■□□□□ -0
NPIPB3Q92617 Z98044.1-201ENST00000632503 1764 ntBASIC15.05■□□□□ -0
NPIPB3Q92617 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.05■□□□□ -0
NPIPB3Q92617 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
NPIPB3Q92617 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB3Q92617 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NPIPB3Q92617 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.04■□□□□ -0
NPIPB3Q92617 WIZP1-201ENST00000531444 2299 ntBASIC15.04■□□□□ -0
NPIPB3Q92617 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NPIPB3Q92617 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NPIPB3Q92617 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.04■□□□□ -0
NPIPB3Q92617 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
NPIPB3Q92617 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.04■□□□□ -0
NPIPB3Q92617 TSPY6P-201ENST00000448518 926 ntBASIC15.04■□□□□ -0
NPIPB3Q92617 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.04■□□□□ -0
NPIPB3Q92617 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.04■□□□□ -0
NPIPB3Q92617 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.04■□□□□ -0
NPIPB3Q92617 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.04■□□□□ -0
NPIPB3Q92617 KRT18P16-201ENST00000510337 1294 ntBASIC15.04■□□□□ -0
NPIPB3Q92617 PNMA6B-201ENST00000538162 1200 ntBASIC15.04■□□□□ -0
NPIPB3Q92617 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.04■□□□□ -0
NPIPB3Q92617 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.04■□□□□ -0
NPIPB3Q92617 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
NPIPB3Q92617 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NPIPB3Q92617 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB3Q92617 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms