Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SVIPQ8NHG7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12□□□□□ -0.49
SVIPQ8NHG7 AC092335.1-201ENST00000509037 2066 ntTSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12□□□□□ -0.49
SVIPQ8NHG7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12□□□□□ -0.49
SVIPQ8NHG7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SVIPQ8NHG7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12□□□□□ -0.49
SVIPQ8NHG7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SVIPQ8NHG7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SVIPQ8NHG7 EYA3-202ENST00000373864 2459 ntTSL 5 BASIC12□□□□□ -0.49
SVIPQ8NHG7 CSNK1G1-207ENST00000634654 2485 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
SVIPQ8NHG7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12□□□□□ -0.49
SVIPQ8NHG7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12□□□□□ -0.49
SVIPQ8NHG7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12□□□□□ -0.49
SVIPQ8NHG7 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SVIPQ8NHG7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12□□□□□ -0.49
SVIPQ8NHG7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 PCDHB19P-201ENST00000570871 2371 ntBASIC11.99□□□□□ -0.49
SVIPQ8NHG7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 HNRNPR-201ENST00000302271 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 SCNM1-202ENST00000368905 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 SLC25A25-201ENST00000373064 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SVIPQ8NHG7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 PCDHGB8P-202ENST00000507007 2873 ntBASIC11.98□□□□□ -0.49
SVIPQ8NHG7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 UGT1A7-201ENST00000373426 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 AL354751.1-201ENST00000412768 1863 ntBASIC11.98□□□□□ -0.49
SVIPQ8NHG7 POM121L6P-201ENST00000441186 1826 ntBASIC11.98□□□□□ -0.49
SVIPQ8NHG7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 AC005224.4-201ENST00000583262 1652 ntBASIC11.98□□□□□ -0.49
SVIPQ8NHG7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 POU2F2-201ENST00000342301 3730 ntTSL 5 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms