Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4RL1Q86UN2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4RL1Q86UN2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RTN4RL1Q86UN2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.53■□□□□ 0.88
RTN4RL1Q86UN2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RTN4RL1Q86UN2 KRT8P3-201ENST00000519669 1449 ntBASIC20.53■□□□□ 0.88
RTN4RL1Q86UN2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 SEC1P-202ENST00000473944 940 ntBASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 AC092119.3-201ENST00000612618 583 ntBASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RTN4RL1Q86UN2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
RTN4RL1Q86UN2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.52■□□□□ 0.87
RTN4RL1Q86UN2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 AC016734.2-201ENST00000624325 1377 ntBASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 AC026396.1-201ENST00000419388 421 ntBASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 AC034232.1-201ENST00000506026 1064 ntBASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 MIR3180-5-201ENST00000583743 153 ntBASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4RL1Q86UN2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4RL1Q86UN2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4RL1Q86UN2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4RL1Q86UN2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4RL1Q86UN2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
RTN4RL1Q86UN2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RTN4RL1Q86UN2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4RL1Q86UN2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4RL1Q86UN2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.49■□□□□ 0.87
RTN4RL1Q86UN2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RTN4RL1Q86UN2 MCCD1P1-208ENST00000445732 328 ntBASIC20.49■□□□□ 0.87
RTN4RL1Q86UN2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.49■□□□□ 0.87
RTN4RL1Q86UN2 MIR3180-1-201ENST00000580374 94 ntBASIC20.49■□□□□ 0.87
RTN4RL1Q86UN2 MIR3180-3-201ENST00000584616 94 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms