Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 TSPY23P-201ENST00000440136 739 ntBASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 AC141257.4-201ENST00000634557 245 ntBASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 AC136944.6-201ENST00000634818 245 ntBASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 SDHAP1-207ENST00000440850 2000 ntBASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.61■□□□□ 0.41
H3F3CQ6NXT2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 AK4P3-201ENST00000418260 669 ntBASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 AC117947.1-201ENST00000427448 529 ntBASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 TREX1-205ENST00000625293 1783 ntBASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 AL020996.1-203ENST00000536896 2307 ntBASIC17.6■□□□□ 0.41
H3F3CQ6NXT2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
H3F3CQ6NXT2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
H3F3CQ6NXT2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
H3F3CQ6NXT2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3CQ6NXT2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3CQ6NXT2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3CQ6NXT2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3CQ6NXT2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3CQ6NXT2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3CQ6NXT2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3CQ6NXT2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3CQ6NXT2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
H3F3CQ6NXT2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms