Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 AL023284.2-201ENST00000405850 579 ntBASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 FAM197Y8-203ENST00000450145 560 ntBASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 RNPS1P1-201ENST00000507437 918 ntBASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 AC106730.1-201ENST00000566722 1090 ntBASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 MIR3180-5-201ENST00000583743 153 ntBASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCRAQ6ISU1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 AC079834.2-201ENST00000609776 1949 ntBASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 MIR940-201ENST00000401276 94 ntBASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 AL031284.1-201ENST00000419297 478 ntBASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 AC005332.3-201ENST00000589904 676 ntBASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PTCRAQ6ISU1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 IGHV3-47-201ENST00000425060 335 ntBASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 AC005104.2-201ENST00000427818 678 ntBASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCRAQ6ISU1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTCRAQ6ISU1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTCRAQ6ISU1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
PTCRAQ6ISU1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 AC093909.1-201ENST00000504731 1122 ntBASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCRAQ6ISU1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCRAQ6ISU1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PTCRAQ6ISU1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCRAQ6ISU1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCRAQ6ISU1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCRAQ6ISU1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PTCRAQ6ISU1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCRAQ6ISU1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.63■□□□□ 0.73
PTCRAQ6ISU1 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms