Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HTRA3P83110 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
HTRA3P83110 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.2■■□□□ 1.14
HTRA3P83110 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HTRA3P83110 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HTRA3P83110 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
HTRA3P83110 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HTRA3P83110 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HTRA3P83110 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HTRA3P83110 AL645939.2-201ENST00000427340 991 ntBASIC22.19■■□□□ 1.14
HTRA3P83110 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC22.19■■□□□ 1.14
HTRA3P83110 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HTRA3P83110 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.19■■□□□ 1.14
HTRA3P83110 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.19■■□□□ 1.14
HTRA3P83110 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HTRA3P83110 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HTRA3P83110 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HTRA3P83110 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
HTRA3P83110 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
HTRA3P83110 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.18■■□□□ 1.14
HTRA3P83110 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
HTRA3P83110 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.18■■□□□ 1.14
HTRA3P83110 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HTRA3P83110 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
HTRA3P83110 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
HTRA3P83110 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.18■■□□□ 1.14
HTRA3P83110 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HTRA3P83110 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
HTRA3P83110 RN7SL606P-201ENST00000472779 293 ntBASIC22.18■■□□□ 1.14
HTRA3P83110 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC22.18■■□□□ 1.14
HTRA3P83110 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HTRA3P83110 SPCS2P1-201ENST00000561636 679 ntBASIC22.18■■□□□ 1.14
HTRA3P83110 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.18■■□□□ 1.14
HTRA3P83110 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.18■■□□□ 1.14
HTRA3P83110 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC22.18■■□□□ 1.14
HTRA3P83110 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
HTRA3P83110 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.17■■□□□ 1.14
HTRA3P83110 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.17■■□□□ 1.14
HTRA3P83110 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HTRA3P83110 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
HTRA3P83110 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
HTRA3P83110 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
HTRA3P83110 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.17■■□□□ 1.14
HTRA3P83110 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HTRA3P83110 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC22.17■■□□□ 1.14
HTRA3P83110 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.17■■□□□ 1.14
HTRA3P83110 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.17■■□□□ 1.14
HTRA3P83110 AC004832.2-201ENST00000426397 482 ntBASIC22.17■■□□□ 1.14
HTRA3P83110 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.17■■□□□ 1.14
HTRA3P83110 AC092910.1-201ENST00000482027 1129 ntBASIC22.17■■□□□ 1.14
HTRA3P83110 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.17■■□□□ 1.14
HTRA3P83110 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC22.17■■□□□ 1.14
HTRA3P83110 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.17■■□□□ 1.14
HTRA3P83110 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.17■■□□□ 1.14
HTRA3P83110 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC22.17■■□□□ 1.14
HTRA3P83110 BNIP3P18-201ENST00000593976 575 ntBASIC22.17■■□□□ 1.14
HTRA3P83110 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.17■■□□□ 1.14
HTRA3P83110 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HTRA3P83110 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.17■■□□□ 1.14
HTRA3P83110 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HTRA3P83110 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.17■■□□□ 1.14
HTRA3P83110 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
HTRA3P83110 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.17■■□□□ 1.14
HTRA3P83110 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.16■■□□□ 1.14
HTRA3P83110 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
HTRA3P83110 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HTRA3P83110 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HTRA3P83110 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HTRA3P83110 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HTRA3P83110 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.16■■□□□ 1.14
HTRA3P83110 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
HTRA3P83110 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
HTRA3P83110 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HTRA3P83110 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.15■■□□□ 1.14
HTRA3P83110 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.15■■□□□ 1.14
HTRA3P83110 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HTRA3P83110 PTMS-202ENST00000389462 773 ntTSL 2 BASIC22.15■■□□□ 1.14
HTRA3P83110 AC007967.2-201ENST00000432613 625 ntBASIC22.15■■□□□ 1.14
HTRA3P83110 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.15■■□□□ 1.14
HTRA3P83110 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
HTRA3P83110 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC22.15■■□□□ 1.14
HTRA3P83110 FGFR3P6-201ENST00000457012 610 ntBASIC22.15■■□□□ 1.14
HTRA3P83110 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC22.15■■□□□ 1.14
HTRA3P83110 RNA5SP415-201ENST00000517246 115 ntBASIC22.15■■□□□ 1.14
HTRA3P83110 Z83851.2-201ENST00000609564 659 ntBASIC22.15■■□□□ 1.14
HTRA3P83110 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HTRA3P83110 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
HTRA3P83110 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HTRA3P83110 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HTRA3P83110 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC22.14■■□□□ 1.13
HTRA3P83110 VENTXP7-201ENST00000475503 772 ntBASIC22.14■■□□□ 1.13
HTRA3P83110 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC22.14■■□□□ 1.13
HTRA3P83110 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.14■■□□□ 1.13
HTRA3P83110 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HTRA3P83110 AC009533.2-201ENST00000543664 586 ntBASIC22.14■■□□□ 1.13
HTRA3P83110 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.14■■□□□ 1.13
HTRA3P83110 SNHG9-202ENST00000564014 471 ntBASIC22.14■■□□□ 1.13
HTRA3P83110 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.14■■□□□ 1.13
HTRA3P83110 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC22.14■■□□□ 1.13
HTRA3P83110 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms